jingwanglab / Populus_superpangenomeLinks
Scripts for Shi et al. (2024). The suer-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees
☆14Updated last year
Alternatives and similar repositories for Populus_superpangenome
Users that are interested in Populus_superpangenome are comparing it to the libraries listed below
Sorting:
- ☆12Updated 5 years ago
- ☆27Updated 2 months ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Updated 5 years ago
- Centromics: visualing centromeres with multiple omics data☆22Updated 3 months ago
- Centromics: visualing centromeres with multiple omics data☆18Updated last year
- ☆25Updated 3 years ago
- Selection outlier scan with population branch statistic☆13Updated last year
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆28Updated 3 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 4 months ago
- ☆20Updated 9 months ago
- ☆31Updated 9 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- Some useful gadgets☆10Updated 3 years ago
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- scripts☆16Updated 6 years ago
- a Semi-automated pipeline for assembling T2T genome☆17Updated 3 weeks ago
- Genome haplotype assembly and assessment method☆12Updated last year
- ☆16Updated 3 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆24Updated last year
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Updated 4 years ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- ☆12Updated 3 weeks ago
- ☆29Updated 2 months ago
- ☆25Updated 2 years ago
- This is a method to find telomeres and centromeres in plants.☆40Updated last year
- Analyses of sex chromosome evolution in songbirds☆16Updated 5 years ago
- ☆40Updated last year
- Pan-genome Construction and Population Structure Variation Calling pipeline☆40Updated 8 months ago
- ☆12Updated last year