☆12Jun 12, 2023Updated 3 years ago
Alternatives and similar repositories for Structural-Annotation
Users that are interested in Structural-Annotation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- I often use some of the self-written programs.☆16Jun 12, 2026Updated 4 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Sep 7, 2026Updated last month
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆32Apr 2, 2026Updated 6 months ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Oct 13, 2026Updated 2 weeks ago
- Imputation workflow for low coverage whole genome sequencing data☆10Jan 8, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 9 months ago
- ☆21Oct 10, 2020Updated 6 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Cookiecutter for snakemake slurm profile☆17Jul 22, 2023Updated 3 years ago
- ☆12Sep 28, 2021Updated 5 years ago
- ☆11Mar 14, 2026Updated 7 months ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated 2 years ago
- ☆24Apr 17, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- A graduate-level elective course: Python Programming for Life Science Students☆10Mar 26, 2026Updated 7 months ago
- Trim, Align to genome, Deduplicate, Realign WGS sequencing samples☆18Feb 23, 2026Updated 8 months ago
- the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics☆17Aug 25, 2022Updated 4 years ago
- ☆18Dec 15, 2021Updated 4 years ago
- ☆20Oct 4, 2023Updated 3 years ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 4 years ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆24Jun 14, 2024Updated 2 years ago
- A python package for the identification of lncRNA from the assembled novel transcripts☆17Oct 28, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- ☆12May 24, 2022Updated 4 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Oct 16, 2026Updated last week
- Repository☆10Oct 23, 2024Updated 2 years ago
- Genome-wide association studies (GWAS) for ordered categorical phenotypes☆23Updated this week
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 5 years ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 5 years ago
- Phasing and genotype Imputation comparison. Have been evaluated: BEAGLE 5.4, EAGLE 2.4.1, SHAPEIT 4, MINIMAC 4, IMPUTE 5, using accuracy …☆23Feb 29, 2024Updated 2 years ago
- PAQman is a tool for a reference-free and comprehensive evaluation of genome assemblies☆10Sep 5, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆10Apr 10, 2016Updated 10 years ago
- This is the site where we store shared code for the Michigan Mycology Lab☆18Apr 10, 2024Updated 2 years ago
- Statistical Rethinking Course 2024 with Python☆10Jan 7, 2024Updated 2 years ago
- A tool to visualize the haplotype pattern and various information in excel.☆25Mar 5, 2025Updated last year
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 9 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- A machine learning model for the prediction of lncRNAs (Singh et. al NAR 2017)☆11Jan 19, 2022Updated 4 years ago