ucdavis-bioinformatics-training / 2019-single-cell-RNA-sequencing-Workshop-UCD_UCSFLinks
2019 single cell RNA sequencing Workshop @ UCD AND UCSF
☆17Updated 5 years ago
Alternatives and similar repositories for 2019-single-cell-RNA-sequencing-Workshop-UCD_UCSF
Users that are interested in 2019-single-cell-RNA-sequencing-Workshop-UCD_UCSF are comparing it to the libraries listed below
Sorting:
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Updated 4 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- ☆29Updated 2 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆38Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Clone of the Bioconductor repository for the batchelor package.☆16Updated 2 months ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- ☆40Updated 7 years ago
- ☆47Updated 5 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆19Updated last year
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆25Updated 5 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Updated 2 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Analysis notebooks and data for AML hierarchies paper☆16Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- R/Bioconductor package for working with 10x scATACseq data☆40Updated last year
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- ☆18Updated last year
- ☆41Updated 4 years ago
- R package for Bioconductor submission☆34Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- GLASS consortium☆13Updated 3 years ago
- ☆14Updated 6 years ago