BaderLab / HumanLiverLinks
R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations
☆30Updated 5 years ago
Alternatives and similar repositories for HumanLiver
Users that are interested in HumanLiver are comparing it to the libraries listed below
Sorting:
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆75Updated 2 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- ☆55Updated 5 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- scWGCNA☆61Updated 3 years ago
- ☆63Updated 5 years ago
- scRNA-seq cell type identification☆43Updated 6 years ago
- Clone of the Bioconductor repository for the scran package.☆45Updated last year
- ☆41Updated 4 years ago
- R package for robust clustering of single cell RNA sequencing data☆36Updated last year
- ☆43Updated 4 years ago
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆26Updated 7 years ago
- Pipeline for characterizing metebolic heterogeneity from single-cell RNA-seq data☆22Updated 4 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 5 years ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆91Updated 6 months ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 5 months ago
- ☆40Updated 7 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆40Updated 4 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆86Updated last week
- ☆59Updated last year
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 6 years ago
- ☆30Updated 7 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆45Updated last year
- Capybara: A computational tool to measure cell identity and fate transitions☆60Updated 3 years ago
- All software used for “Decoding human fetal liver haematopoiesis” (Popescu, Botting, Stephenson et al., 2019).☆39Updated 5 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- ☆37Updated 9 years ago