wgmao / PLIERLinks
Pathway-Level Information Extractor (PLIER): a generative model for gene expression data
☆54Updated 10 months ago
Alternatives and similar repositories for PLIER
Users that are interested in PLIER are comparing it to the libraries listed below
Sorting:
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- Fast motif matching in R☆47Updated last year
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- ConsensusTME Gene Sets and R Script☆39Updated last year
- ☆41Updated 4 years ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- post-clustering differential expression test☆35Updated 6 years ago
- ☆36Updated last year
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆30Updated 2 months ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆32Updated 3 years ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- Identify and correct invalid gene symbols☆58Updated 8 months ago