This is a web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat.
☆14Sep 24, 2019Updated 6 years ago
Alternatives and similar repositories for SeuratWizard
Users that are interested in SeuratWizard are comparing it to the libraries listed below
Sorting:
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Sep 14, 2020Updated 5 years ago
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 2 years ago
- Brendan's skeleton scRNAseq workflow using scran, Seurat, and scClustViz☆11Apr 22, 2020Updated 5 years ago
- 2019 single cell RNA sequencing Workshop @ UCD AND UCSF☆17Nov 25, 2019Updated 6 years ago
- ☆19Jul 6, 2023Updated 2 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆19May 24, 2021Updated 4 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆15Oct 27, 2022Updated 3 years ago
- cyclone☆19Jul 21, 2015Updated 10 years ago
- Multi-Enrichment Analysis of Gene Set Enrichment Analysis Results☆26Feb 25, 2026Updated last week
- ☆22May 6, 2022Updated 3 years ago
- R package to visualize scRNA sequencing data.☆20Feb 4, 2022Updated 4 years ago
- Lightweight pipeline for processing droplet-based single-cell RNA-seq data☆18Nov 4, 2020Updated 5 years ago
- Documents used for workshops on single cell analysis☆27Feb 5, 2017Updated 9 years ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆32Dec 22, 2022Updated 3 years ago
- Single cell RNA-seq analysis for transcriptomic type characterization☆38Sep 17, 2025Updated 5 months ago
- ☆11Mar 1, 2020Updated 6 years ago
- ☆13May 3, 2024Updated last year
- A system statistics reporter written in python☆11Mar 10, 2024Updated last year
- ☆13Feb 27, 2024Updated 2 years ago
- ☆13Jun 15, 2024Updated last year
- Single-cell genomic sequencing of the human gut microbiome☆12Jun 12, 2024Updated last year
- ☆14Mar 8, 2024Updated last year
- ☆11Feb 11, 2021Updated 5 years ago
- Analysis code and results for dreamlet☆11Jul 18, 2025Updated 7 months ago
- Learn Japanese using music. Frontend written in Nuxt.js and optional backend using Litserve☆19Jun 2, 2025Updated 9 months ago
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated 6 months ago
- The R/Python scripts for the analysis of single-cell RNA-seq data from COVID-19 patients☆10Dec 16, 2020Updated 5 years ago
- R package for analysis of single-cell data using graphs☆10Jun 8, 2023Updated 2 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆37Mar 15, 2023Updated 2 years ago
- R package containing the Cerebro application.☆40Nov 21, 2021Updated 4 years ago
- MATLAB implementation of Gene Set Enrichment Analysis (GSEA) method for finding pathways which can show more complex relation between cha…☆10Sep 7, 2022Updated 3 years ago
- Companion repository for the human variant calling pipeline comparison paper☆11Feb 21, 2022Updated 4 years ago
- Tiny R kafka client with rscala☆10Mar 26, 2017Updated 8 years ago
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Jun 7, 2022Updated 3 years ago
- Post hoc cell type classification of single-cell RNA-sequencing data.☆10Oct 5, 2021Updated 4 years ago
- ☆12Nov 26, 2025Updated 3 months ago
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆21Feb 2, 2026Updated last month
- Code for the paper on t-SNE with variable degree of freedom☆12Jun 27, 2019Updated 6 years ago
- A lightweight JavaScript task queue☆11Feb 25, 2025Updated last year