Kyoko-wtnb / FUMA_scRNA_dataLinks
Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
☆23Updated 5 years ago
Alternatives and similar repositories for FUMA_scRNA_data
Users that are interested in FUMA_scRNA_data are comparing it to the libraries listed below
Sorting:
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- ☆20Updated last year
- ☆23Updated 3 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 2 years ago
- ☆33Updated 2 years ago
- Regional association plots☆25Updated last year
- Primo☆16Updated 3 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Colocalization analysis of genetic association signals☆53Updated last week
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- ☆35Updated 4 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- ☆21Updated 2 months ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆30Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆25Updated 2 years ago
- Upgrade to coloc☆13Updated 6 years ago
- ☆48Updated last month
- A Shiny tool to define the cell-type of action by integrating single cell expression data with GWAS☆12Updated 6 years ago
- ☆23Updated 2 weeks ago
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆16Updated last week
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Updated 5 years ago
- A collection of various utilities for GWAS summary statistics☆27Updated last year
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆26Updated this week
- QTL Discovery using Annotations☆25Updated 2 years ago