Kyoko-wtnb / FUMA_scRNA_dataLinks
Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
☆24Updated 5 years ago
Alternatives and similar repositories for FUMA_scRNA_data
Users that are interested in FUMA_scRNA_data are comparing it to the libraries listed below
Sorting:
- Regional association plots☆25Updated last year
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- ☆35Updated 2 years ago
- ☆36Updated 4 years ago
- ☆20Updated last month
- Colocalization analysis of genetic association signals☆52Updated 2 months ago
- S-LDSC scripts for use on MR server.☆10Updated 3 years ago
- ☆23Updated 4 years ago
- Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types☆34Updated 3 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆28Updated last week
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Genetics ToolboX R package☆32Updated 5 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆15Updated 5 years ago
- ☆29Updated 3 weeks ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Updated 6 months ago
- CELLEX (CELL-type EXpression-specificity)☆43Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- ☆48Updated 3 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆57Updated 3 years ago
- R package for robust clustering of single cell RNA sequencing data☆40Updated 2 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 3 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 2 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆10Updated 7 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- ☆18Updated 4 years ago