maximz / malid
☆17Updated 8 months ago
Alternatives and similar repositories for malid
Users that are interested in malid are comparing it to the libraries listed below
Sorting:
- Quantifiable predictive features define epitope-specific T cell receptor repertoires☆13Updated 2 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated last month
- ☆36Updated 10 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Explore the cancer relevance of your gene list☆51Updated 2 months ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆40Updated 7 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- ☆41Updated 4 years ago
- Processing of single cell RNAseq data for the recovery of TCRs in python☆28Updated 4 years ago
- Predicted cell-cell interactions of the aging mouse brain☆20Updated 5 years ago
- ☆54Updated last year
- An R package for visualising cell-cell interactions☆44Updated 9 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Computational identification of targets for CAR-T cell therapy in AML☆16Updated 2 years ago
- ☆24Updated 2 years ago
- Course Materials for Genomics Data Mining☆22Updated 3 months ago
- Summary statistics for repertoires☆17Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 11 months ago
- ☆29Updated 6 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆30Updated 3 years ago
- R package for the analysis of single-cell immune repertoires☆42Updated 3 months ago
- Analysis notebooks and data for AML hierarchies paper☆16Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆43Updated 5 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆11Updated last week
- ☆21Updated 3 years ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆37Updated last year