ncborcherding / TRGAtedLinks
Survival Analysis for Protein-Level TCGA Analysis
☆11Updated 7 years ago
Alternatives and similar repositories for TRGAted
Users that are interested in TRGAted are comparing it to the libraries listed below
Sorting:
- ☆17Updated 2 years ago
- Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage☆12Updated 5 years ago
- Explore the cancer relevance of your gene list☆52Updated last week
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- Gene-level general linear mixed model☆23Updated 2 months ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆33Updated 4 years ago
- iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data☆24Updated 6 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- R package☆21Updated last year
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Code to reproduce TNBC analysis and figures☆25Updated 3 years ago
- ☆25Updated 6 months ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 7 years ago
- Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously☆37Updated 2 years ago
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Updated last month
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Updated 4 years ago
- ☆17Updated last year
- ☆22Updated 6 years ago
- CircRNA testing and ploting R package☆10Updated 5 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- From IDAT to beta.☆25Updated 7 years ago
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆26Updated last year
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆44Updated 5 years ago
- Code for the paper on the ICR immune signatures and prognostic significance pan-cancer (TCGA)☆10Updated 5 years ago
- ☆14Updated 6 years ago