tkzeng / GeneBayes
☆20Updated 7 months ago
Related projects ⓘ
Alternatives and complementary repositories for GeneBayes
- ☆21Updated this week
- Structural variant VCF annotation, duplicate removal and comparison☆27Updated last month
- BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool☆20Updated last year
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆21Updated this week
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆23Updated 2 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆54Updated 2 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated last week
- LongcallR is a small variant caller for single molecule long-read RNA-seq data☆41Updated last month
- End-guided RNA assembler☆15Updated this week
- ☆15Updated 2 years ago
- ☆21Updated last month
- ☆20Updated 11 months ago
- Evolutionary Transcriptomics with R☆41Updated this week
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆24Updated 4 years ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆41Updated last month
- Repository for pipeline code☆24Updated 8 months ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆20Updated 3 years ago
- ☆23Updated 3 years ago
- ☆21Updated 2 months ago
- SpecHLA reconstructs entire diploid sequences of HLA genes and infers LOH events. It supports HLA-A, -B, -C, -DPA1, -DPB1, -DQA1, -DQB1, …☆36Updated last month
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- Immuological gene typing and annotation for genome assembly☆31Updated 3 weeks ago
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆31Updated 5 years ago
- Phase reads, assemble haplotypes and detect SVs☆19Updated 3 years ago
- Haplotype and population structure inference using neural networks.☆26Updated 3 months ago
- Distribution of TEs and their relationship to genes in host genome☆22Updated last year
- Deep learning-based structural variant filtering method☆35Updated 11 months ago
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆21Updated 2 months ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆22Updated 5 months ago