Sentieon / sentieon-modelsLinks
Model files for Sentieon variant callers
☆16Updated last month
Alternatives and similar repositories for sentieon-models
Users that are interested in sentieon-models are comparing it to the libraries listed below
Sorting:
- ☆44Updated last year
- Location of public benchmarking; primarily final results☆18Updated 8 months ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- A variant caller for the GBA gene using WGS data☆23Updated last year
- ☆25Updated 6 months ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 2 months ago
- Structural variant (SV) analysis tools☆38Updated last year
- TIDDIT - structural variant calling☆77Updated 6 months ago
- Automated Detection and Qualification of Differential Methylation☆14Updated last year
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆33Updated 2 years ago
- Working space for the GIAB TR benchmarking project☆23Updated last year
- ☆23Updated 5 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 2 weeks ago
- Algorithm to detect germline and de novo transposon insertions☆31Updated 2 months ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆36Updated this week
- Python package and routines for merging VCF files☆29Updated 4 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- Structural Variant Prediction Viewer☆35Updated 8 years ago
- A VSCode extension pack for nf-core developers.☆15Updated 7 months ago
- Human reference genome analysis sets☆55Updated 2 years ago
- Immuological gene typing and annotation for genome assembly☆38Updated 7 months ago
- for visual evaluation of read support for structural variation☆55Updated last year
- Toolkit for genome-wide analysis of tandem repeats☆58Updated last month
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Method to detect exonic CNVs in NGS Gene Targeted Panels☆16Updated 5 years ago
- fusion transcript detection using long reads, leveraging ctat-minimap2 and FusionInspector☆22Updated 3 weeks ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆18Updated 2 years ago
- SV analysis of the long-read sequencing data of the 1019 samples of the 1KG-ONT panel☆37Updated 6 months ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago