Alternatives and similar repositories for genetic_support

Users that are interested in genetic_support are comparing it to the libraries listed below

• opentargets / genetics-gold-standards
  GWAS gold standards repository
  ☆34Updated last year
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆51Updated 3 months ago
• ajaynadig / bhr
  Suite of heritability and genetic correlation estimation tools for exome-sequencing data
  ☆33Updated 3 months ago
• Townsend-Lab-Yale / cancereffectsizeR
  cancereffectsizeR: Estimate somatic mutation rates and quantify selection in cancer
  ☆18Updated 2 weeks ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆39Updated 2 years ago
• broadinstitute / mix_seq_ms
  Code associated with MIX-seq manuscript
  ☆15Updated 4 years ago
• ELELAB / MoonlightR
  ☆17Updated last year
• Genentech / midasHLA
  R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…
  ☆12Updated last year
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆18Updated 3 years ago
• Simon-Coetzee / motifBreakR
  A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.
  ☆29Updated 10 months ago
• matsengrp / sumrep
  Summary statistics for repertoires
  ☆17Updated 2 years ago
• slowkow / hlabud
  🐶 hlabud: HLA genotype analysis in R
  ☆16Updated last month
• cboix / epimap_vis
  Code for EpiMap data browser
  ☆14Updated last year
• jsalignon / cactus
  Chromatin ACcessibility and Transcriptomics Unifying Software
  ☆16Updated 7 months ago
• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆14Updated last year
• BorchLab / Ibex
  Using BCR and expression for sequence embedding
  ☆22Updated last week
• HelenaLC / muscat-comparison
  ☆12Updated last year
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 2 years ago
• Papatheodorou-Group / CATD_snakemake
  Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…
  ☆15Updated last month
• mikelove / zinbwave-deseq2
  Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq
  ☆31Updated 4 years ago
• yigbt / multiGSEA
  The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.
  ☆18Updated last month
• hart-lab / bagel
  BAGEL software
  ☆27Updated last year
• satijalab / scChromHMM
  🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…
  ☆28Updated 3 years ago
• dakwok / SSNIP
  The Spatial Splicing-derived Neoantigen Identifier Pipeline (SSNIP) allows for the precise characterization of neoantigens derived from c…
  ☆19Updated last month
• songlab-cal / scquint
  ☆17Updated last year
• mandricigor / imrep
  ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
  ☆28Updated 5 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• fmicompbio / monaLisa
  binned motif enrichment analysis and visualisation
  ☆40Updated last month
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 5 years ago
• immunogenomics / scHLApers
  Code to run the scHLApers pipeline for personalized single-cell HLA quantification
  ☆17Updated last year