seandavi / MachineLearningIntro
Machine learning use cases for teaching
☆13Updated 7 years ago
Alternatives and similar repositories for MachineLearningIntro:
Users that are interested in MachineLearningIntro are comparing it to the libraries listed below
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 8 months ago
- ☆10Updated 9 months ago
- ☆10Updated 5 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Updated 12 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 5 years ago
- Examples of kallisto + sleuth☆11Updated 7 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Updated 2 months ago
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆15Updated last year
- Archived version of RUVSeq☆8Updated 7 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- Correctly counting molecules using unique molecular identifiers (UMIs)☆9Updated 3 years ago
- CNAqc - Copy Number Alteration (CNA) Quality Check package☆19Updated 3 months ago
- Interactive benchmarking of ranking and assignment methods☆14Updated last month
- Python function for TMB snake plots☆16Updated 4 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆13Updated 3 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 7 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 3 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 6 months ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated last year
- TOP results by CONfident efFECT Sizes.☆14Updated 2 months ago