adhikari-statgen-lab / fastmanLinks
An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
☆39Updated 3 weeks ago
Alternatives and similar repositories for fastman
Users that are interested in fastman are comparing it to the libraries listed below
Sorting:
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆50Updated 7 months ago
- Statistical tools for Quantitative Genetic Analyses☆38Updated 2 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated last year
- Pan-transcriptomic phenotyping☆19Updated last week
- Manhattan++☆28Updated last year
- QTL Discovery using Annotations☆26Updated 2 years ago
- Generalized linear Mixed Model Association Tests☆44Updated last year
- causal TWAS (cTWAS)☆46Updated last month
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆25Updated 11 months ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆32Updated 4 months ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Flexible Bayesian inference of mutational signatures☆36Updated 2 years ago
- Query the gene models of a given organism/assembly☆27Updated 2 months ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated last year
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆85Updated 2 years ago
- ☆21Updated 2 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Colocalization analysis of genetic association signals☆53Updated 4 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆42Updated 10 months ago
- R package wrapping bedtools☆44Updated 7 months ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 8 months ago
- ☆46Updated 3 months ago
- ☆18Updated 7 years ago
- ☆63Updated 3 years ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- ☆30Updated 4 years ago
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago