An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.
ā39Feb 8, 2026Updated 2 months ago
Alternatives and similar repositories for fastman
Users that are interested in fastman are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 š£ā11Apr 28, 2023Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics dataā29Aug 2, 2022Updated 3 years ago
- user-friendly pipeline for GWAS fine-mappingā14Mar 9, 2025Updated last year
- Heritability Estimation with high Efficiency using LD and Summary Statisticsā13Feb 14, 2024Updated 2 years ago
- GWAS genetics Fine-mapping methodā17May 17, 2024Updated last year
- Virtual machines for every use case on DigitalOcean ā¢ AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- An R package for plotting GWAS results from the GAPIT packageā14Oct 9, 2025Updated 6 months ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)ā33Feb 10, 2026Updated 2 months ago
- Regional association plotsā27Apr 1, 2024Updated 2 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049ā20Mar 31, 2026Updated 2 weeks ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple pā¦ā73Feb 1, 2026Updated 2 months ago
- Proportional Odds Logistic Mixed Model (POLMM) for ordinal categorical data analysisā11Aug 26, 2022Updated 3 years ago
- a C++ API of htslib to be easily integrated and safely used. More importantly, it can be callled seamlessly in R/Python/Julia etc.ā24Aug 6, 2025Updated 8 months ago
- Cool Bioinformatics Scriptsā12May 21, 2024Updated last year
- Doubly-Ranked Stratification in Mendelian Randomizationā11Jan 10, 2026Updated 3 months ago
- Deploy open-source AI quickly and easily - Bonus Offer ā¢ AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- GenomeTools: Scripts and Classes for Working with Genomic Dataā12Jun 7, 2018Updated 7 years ago
- GWAS Summary Statistics Data Harmonisationā27Jan 7, 2026Updated 3 months ago
- ggplot2-based Manhattan plotā12Oct 18, 2022Updated 3 years ago
- https://filippob.github.io/introduction_to_gwas/ā22Jul 2, 2025Updated 9 months ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.ā18Jan 21, 2026Updated 2 months ago
- Python script for multivariate GWAS meta-analysisā24Dec 6, 2024Updated last year
- R package to perform Bayesian Genome-Wide Association Studiesā41Oct 10, 2023Updated 2 years ago
- Binaries for tools used in genetics in an R packageā12Apr 7, 2025Updated last year
- Bioinformatics pipelines for Resolweā19Mar 24, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI ā¢ AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotationā22Mar 26, 2022Updated 4 years ago
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".ā17Jan 17, 2023Updated 3 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.ā81Oct 7, 2025Updated 6 months ago
- Analysis pipelines for QTL discovery and GWAS signals interpretationā12Sep 3, 2024Updated last year
- Code accompanying the manuscript "Broad transcriptomic dysregulation across the cerebral cortex in ASD".ā13Aug 10, 2022Updated 3 years ago
- A collection of various utilities for GWAS summary statisticsā33May 14, 2024Updated last year
- Wrapper to a number of SNP web APIsā55Nov 24, 2023Updated 2 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary dataā59Feb 12, 2021Updated 5 years ago
- tips and tricks in genome-wide association studies - a tutorialā14Jul 25, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits ā¢ AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.ā33Apr 10, 2026Updated last week
- ā29Apr 16, 2023Updated 3 years ago
- Selection outlier scan with population branch statisticā15Feb 21, 2024Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/ā292Mar 28, 2026Updated 3 weeks ago
- Scripts to reproduce analyses of tradeSeq paper.ā16Feb 5, 2020Updated 6 years ago
- ā13May 16, 2016Updated 9 years ago
- RSS-NET: Regression with Summary Statistics exploiting Network Topologyā19Apr 23, 2025Updated 11 months ago