A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.
☆14May 3, 2019Updated 7 years ago
Alternatives and similar repositories for Tidy_PopGen_PCA_Plotting
Users that are interested in Tidy_PopGen_PCA_Plotting are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Jul 24, 2026Updated 3 months ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆28Oct 29, 2020Updated 6 years ago
- ☆16Feb 11, 2022Updated 4 years ago
- Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.☆15Aug 14, 2026Updated 2 months ago
- ☆19Jun 28, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆13Aug 18, 2023Updated 3 years ago
- ☆52May 12, 2026Updated 5 months ago
- This project is a collection of tools for bioinformatic processing of ancient DNA data at the Harvard Medical School Reich Lab.☆29Aug 21, 2026Updated 2 months ago
- A workflow for integrating ancient lineages into present-day phylogenies.☆32Jul 24, 2026Updated 3 months ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Feb 27, 2025Updated last year
- ☆105Jun 28, 2026Updated 4 months ago
- pipeline for pseudogene prediction and analysis☆11Jan 26, 2023Updated 3 years ago
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 5 months ago
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Support material for the "Comparative Genomics Laboratory" classes of the MSc in Biodiversity and Evolution at the University of Bologna.☆21Oct 12, 2026Updated 2 weeks ago
- Run and Analyse SLiM Population Genetics Forward Simulations from R.☆10Nov 26, 2025Updated 11 months ago
- Coprolite host Identification pipeline☆13Oct 7, 2026Updated 3 weeks ago
- Convergence analysis using relative rate and correcting for phylogenetic relatedness☆12Apr 25, 2025Updated last year
- Haplotype-based inference of recent effective population size in modern and ancient DNA samples☆14Apr 4, 2025Updated last year
- MYB transcription factors are one of the largest gene family in plants and control many processes. This repository provides additional ba…☆12Feb 26, 2026Updated 8 months ago
- SexEst is an open-source Streamlit web application for predicting biological sex from skeletal measurements using machine learning (XGBoo…☆11Sep 15, 2026Updated last month
- Repository for course 'Statistical methods for archaeological data analysis I: Basic methods' 2021☆15Jul 14, 2021Updated 5 years ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆17May 2, 2023Updated 3 years ago
- population genetic simulations with R and Shiny☆31Nov 3, 2024Updated last year
- Datasets from studies of cultural evolution in Archaeology☆16Jun 16, 2022Updated 4 years ago
- "Archaeogenetics analysis of Anatolia"☆14Jan 27, 2021Updated 5 years ago
- Genome-wide Association Study (GWAS) Tutorial☆41Apr 12, 2019Updated 7 years ago
- ☆13Mar 22, 2022Updated 4 years ago
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 8 months ago
- HyPhy tutorials☆11Apr 9, 2018Updated 8 years ago
- ☆14Mar 7, 2021Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- QTL mapping in outcrossing species using CIM☆10Feb 5, 2026Updated 8 months ago
- Whole genome core alignments from multiple draft genomes☆13Sep 14, 2016Updated 10 years ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 10 years ago
- ☆17Oct 7, 2024Updated 2 years ago
- Eigen tools by Nick Patterson and Alkes Price lab☆207Jul 20, 2026Updated 3 months ago
- Pipeline for generating reference and perturbed sequences for input into predictive models.☆12Nov 15, 2024Updated last year
- Bioinformatic Tools for analyzing targeted amplicon sequencing developed by Nicholas Hathaway of Bailey Lab☆18Updated this week