Fast, Accurate and Memory-Efficient Principal Component Analysis All in One For Large-scale Dataset
☆52Apr 29, 2026Updated last week
Alternatives and similar repositories for PCAone
Users that are interested in PCAone are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Cool Bioinformatics Scripts☆12May 21, 2024Updated last year
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 4 months ago
- Out-of-Core Principal Component Analysis☆19Dec 25, 2017Updated 8 years ago
- EM-PCA for Ultra-low Coverage Sequencing Data☆18Dec 18, 2025Updated 4 months ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆20Mar 31, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆13May 16, 2016Updated 9 years ago
- Haplotype and population structure inference using neural networks.☆29Dec 5, 2024Updated last year
- Genotype likelihood simulator for VCF/BCF files☆16May 7, 2025Updated 11 months ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆61Jun 27, 2025Updated 10 months ago
- mixture classification, constraint optimization, outlier detection, population structure, admixture history, and selection detection.☆89Jun 14, 2021Updated 4 years ago
- Genome Analysis Workshop (Jena 2016) material☆18Mar 3, 2017Updated 9 years ago
- Time-stratified f-statistics☆16Aug 1, 2025Updated 9 months ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆51Apr 1, 2026Updated last month
- Infer demographic history with the Moran model☆51Jun 14, 2025Updated 10 months ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆44Jul 27, 2023Updated 2 years ago
- ☆95Jun 7, 2025Updated 11 months ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 8 months ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- ☆13May 13, 2024Updated last year
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Jun 12, 2023Updated 2 years ago
- ☆14Apr 14, 2026Updated 3 weeks ago
- Benchmark structural variant calls against a reference set☆18Jan 26, 2026Updated 3 months ago
- Customized codes used in Tibetan wheat sequencing project.☆13Oct 18, 2022Updated 3 years ago
- Program for analysing NGS data.☆258Mar 6, 2025Updated last year
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆105Aug 27, 2025Updated 8 months ago
- Analysis of inference methods on standard population models☆25Dec 3, 2021Updated 4 years ago
- ☆11Mar 14, 2026Updated last month
- Cookiecutter for snakemake slurm profile☆15Jul 22, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Suit of R-scripts to perform landscape genomic analyses☆14May 25, 2020Updated 5 years ago
- ☆19Sep 22, 2022Updated 3 years ago
- Plotly BioVisualization 🎯 Interactive Needle and Manhattan Plots & Alignment Viewer☆11Feb 28, 2020Updated 6 years ago
- ☆16Mar 24, 2025Updated last year
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 3 years ago
- Notes on SNP-related tools and genome variation analysis☆29Aug 30, 2025Updated 8 months ago