Analysis of genotyping and next-generation sequencing data in medical and population genetics
☆23Aug 25, 2022Updated 3 years ago
Alternatives and similar repositories for Copenhagen
Users that are interested in Copenhagen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Course in population genomics at BiRC☆12Mar 18, 2026Updated 4 months ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- Pipelines for analyzing genomic or transcriptomic data☆17Feb 29, 2024Updated 2 years ago
- Scripts for population genetics analysis☆21Nov 10, 2022Updated 3 years ago
- Programs for performing various population genetic analyses☆12Apr 5, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Programs to analyse NGS data for population genetics purposes☆181Aug 27, 2024Updated last year
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆37Dec 4, 2023Updated 2 years ago
- Cool Bioinformatics Scripts☆12May 21, 2024Updated 2 years ago
- an R package for admixture analyses☆19May 15, 2015Updated 11 years ago
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- Utilities for analyzing next generation sequencing data☆17Sep 28, 2018Updated 7 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆31Sep 27, 2019Updated 6 years ago
- Code and binaries related to processing haplotagging data☆16Mar 14, 2022Updated 4 years ago
- Repository for the 2017 Genome Biology publication, "The interplay of demography and selection during maize domestication and expansion"☆17Nov 24, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Shiny apps for teaching Population Genetics☆67Feb 4, 2023Updated 3 years ago
- Handy genetics-related R scripts☆32Nov 22, 2019Updated 6 years ago
- ☆11Jun 26, 2020Updated 6 years ago
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- ☆53May 12, 2026Updated 2 months ago
- ☆14Mar 7, 2021Updated 5 years ago
- Bioinformatics pipeline to process whole genome resequencing data and perform genotype likelihood based population genomic analyses using…☆29Jul 8, 2026Updated 3 weeks ago
- Evaluation of phasing performance☆23Mar 6, 2018Updated 8 years ago
- ☆19Jun 28, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Pipeline in place at the UGI for DNA level analysis☆11Aug 29, 2016Updated 9 years ago
- Calculation of pairwise Linkage Disequilibrium (LD) under a probabilistic framework☆51Nov 13, 2023Updated 2 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆72Oct 24, 2025Updated 9 months ago
- ☆11Mar 8, 2026Updated 4 months ago
- ☆17Dec 2, 2015Updated 10 years ago
- ☆18Dec 3, 2024Updated last year
- ☆16Jan 6, 2022Updated 4 years ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 6 years ago
- Population genetics analyses from NGS data☆27Mar 8, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Vignettes for Population Genetics in R☆26Aug 11, 2020Updated 5 years ago
- Haplotype phaser for next-generation sequencing data☆13Jan 13, 2022Updated 4 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆34Nov 28, 2023Updated 2 years ago
- Maximum a posteriori estimate of contamination for ancient samples☆25Nov 4, 2025Updated 8 months ago
- Genotype likelihood simulator for VCF/BCF files☆16May 7, 2025Updated last year
- Fossil calibrations database☆16Sep 18, 2018Updated 7 years ago
- snakemake workflow for post-processing scATACseq data☆23Jul 15, 2020Updated 6 years ago