aehrc / TRIBES
Finding cryptic relationships to boost disease gene detection
☆12Updated last year
Related projects ⓘ
Alternatives and complementary repositories for TRIBES
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 10 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 3 years ago
- Flexible Bayesian inference of mutational signatures☆33Updated last year
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated last year
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 2 years ago
- ☆25Updated 6 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 3 months ago
- Personal diploid genome creation and coordinate conversion☆21Updated last month
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 3 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 8 years ago
- QC3, a quality control tool designed for DNA sequencing data for raw data, alignment, and variant calling.☆31Updated 8 years ago
- A set of tools to annotate VCF files with expression and readcount data☆25Updated 2 months ago
- Python package and routines for merging VCF files☆29Updated 3 years ago
- Samwell: a python package for using genomic files... well☆19Updated 2 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆27Updated last year
- Liftover VCF files☆16Updated 7 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 2 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 4 years ago
- Evaluation of phasing performance☆21Updated 6 years ago
- Prioritize structural variants based on CADD scores☆28Updated 4 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 6 years ago
- ☆23Updated 5 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- Structural Variation breakpoint discovery via adaptive learning☆15Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- VisCap is an open flexible, software program targeted to clinical laboratories for inference and visualization of germline copy number va…☆22Updated 4 years ago
- ☆21Updated 3 months ago
- Pipeline for structural variation detection in cohorts☆48Updated 3 years ago