ilarsf / gwasTools
Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
☆30Updated 9 months ago
Related projects ⓘ
Alternatives and complementary repositories for gwasTools
- R package to perform Bayesian Genome-Wide Association Studies☆38Updated last year
- Manhattan++☆26Updated 9 months ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆36Updated 5 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- QTL Discovery using Annotations☆23Updated last year
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- ☆16Updated 3 years ago
- Sequence kernel association test (SKAT)☆42Updated last year
- ☆32Updated last year
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆15Updated 9 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆15Updated 3 weeks ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- Colocalization analysis of genetic association signals☆47Updated this week
- Canonical SGE cluster genotype imputation pipeline☆12Updated 8 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated last week
- Flexible Bayesian inference of mutational signatures☆33Updated last year
- Read PLINK BED/BIM/FAM files into R☆39Updated 3 years ago
- Generalized linear Mixed Model Association Tests☆36Updated last year
- Make LocusZoom-like plots with your own LD matrix.☆38Updated 2 years ago
- Functional genomics and genome-wide association studies☆65Updated 6 years ago
- Scripts for implementing the Tractor pipeline☆45Updated 3 months ago
- Cross-population fine-mapping☆27Updated 2 weeks ago
- Enhanced version of the FastQTL QTL mapper☆56Updated last year
- Main ricopili repo for public releases☆42Updated 5 years ago
- ☆30Updated 3 years ago
- Genetics ToolboX R package☆30Updated 4 years ago
- Primo☆16Updated 3 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago