kentsislab / UltraQuantLinks
MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
☆27Updated 7 years ago
Alternatives and similar repositories for UltraQuant
Users that are interested in UltraQuant are comparing it to the libraries listed below
Sorting:
- R package for functionally scoring phosphorylation sites☆20Updated 5 years ago
- ☆62Updated last year
- A Python interface to proteomics data repositories☆34Updated 3 weeks ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆51Updated last month
- pathway and network analysis for metabolomics☆42Updated last year
- ☆55Updated 4 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Absolute quantification package based on quantms.io☆14Updated 2 months ago
- Proteomic Data Analysis with Python (pandas, scikit-learn, numpy, scipy)☆24Updated 2 years ago
- DRUGZ software☆23Updated 3 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆36Updated last week
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago
- A label free quantification tool.☆17Updated 2 weeks ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- ☆38Updated last year
- Python package for investigating the structural context of PTMs☆28Updated 6 months ago
- ☆24Updated 2 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆47Updated 4 months ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆22Updated last month
- ☆27Updated 5 months ago
- A library for QC report based on MultiQC framework☆15Updated this week
- Detects hotspot regions for somatic mutations in 3D protein structures☆3Updated last year
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆88Updated last year
- Differential Expression Analysis tool box R lang package for omics data☆44Updated last week
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- DEqMS is a tool for quantitative proteomic analysis☆23Updated 3 months ago
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆19Updated 6 months ago
- Python client for PRIDE Archive Rest API.☆24Updated 3 months ago
- PRedictor of IMmunogenic Epitopes☆23Updated 2 months ago
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago