kentsislab / UltraQuantLinks
MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
☆27Updated 7 years ago
Alternatives and similar repositories for UltraQuant
Users that are interested in UltraQuant are comparing it to the libraries listed below
Sorting:
- ☆65Updated last year
- A Python interface to proteomics data repositories☆35Updated 3 months ago
- pathway and network analysis for metabolomics☆42Updated last year
- ☆55Updated 4 years ago
- ☆38Updated last year
- Absolute quantification package based on quantms.io☆16Updated last week
- R package for functionally scoring phosphorylation sites☆21Updated 5 years ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆57Updated 3 weeks ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated 2 years ago
- A library for QC report based on MultiQC framework☆21Updated this week
- DRUGZ software☆23Updated 4 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆47Updated 2 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Differential Expression Analysis tool box R lang package for omics data☆45Updated last week
- ☆24Updated 2 years ago
- A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file☆33Updated 4 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆23Updated 4 months ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆30Updated 2 years ago
- Python package for investigating the structural context of PTMs☆28Updated 8 months ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆29Updated last year
- PRedictor of IMmunogenic Epitopes☆24Updated last week
- Python client for PRIDE Archive Rest API.☆24Updated 5 months ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆11Updated 4 months ago
- ☆35Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 7 months ago
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 5 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆23Updated 4 years ago
- Multi-Omics Peptide Generator☆27Updated 3 weeks ago
- De novo peptide sequencing for DDA and DIA by deep learning☆36Updated 4 years ago