Report reverse and ambiguous strand SNPs in GWAS data
☆34May 15, 2019Updated 7 years ago
Alternatives and similar repositories for snpflip
Users that are interested in snpflip are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆54Feb 1, 2019Updated 7 years ago
- Codebook from my GWAS cookbook☆196May 26, 2022Updated 4 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆34Jun 26, 2026Updated last month
- ☆24Mar 20, 2024Updated 2 years ago
- Implementation of a polymorphism aware phylogenetic model using HYPHY☆19Jan 14, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆58Jul 14, 2026Updated last month
- Sanity check Variant Call Format (VCF) files.☆37Mar 18, 2016Updated 10 years ago
- Recombination maps from Bhérer, C. et al. Nature Communications☆13Apr 25, 2017Updated 9 years ago
- Tools to convert to and from vcf format☆14Jun 21, 2017Updated 9 years ago
- ☆15Apr 20, 2023Updated 3 years ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated 2 years ago
- A classroom exercise using HGDP SNP data to introduce population structure concepts☆14Jul 27, 2021Updated 5 years ago
- ☆16Apr 10, 2024Updated 2 years ago
- Linear time detection of Identity by Descent☆13Jul 22, 2011Updated 15 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Polygenic score calculation from VCF in Nim.☆15Nov 22, 2020Updated 5 years ago
- GERMLINE is an algorithm for inferring long shared segments of Identity by Descent (IBD) between pairs of individuals in a large populati…☆16Apr 5, 2019Updated 7 years ago
- processing illumina SNP arrays☆20Feb 3, 2017Updated 9 years ago
- ONCOCNV - a package to detect copy number changes in Targeted Deep Sequencing and Exome-seq data☆25Oct 30, 2025Updated 9 months ago
- Encore Analysis Server☆13Apr 30, 2026Updated 3 months ago
- Scripts for analyses and figures for SNP STR Imputation manuscript☆14Jul 24, 2018Updated 8 years ago
- Genome-wide Association Study (GWAS) Tutorial☆41Apr 12, 2019Updated 7 years ago
- Tools for doing x way meta-analysis☆16Updated this week
- A FUSE interface to the NCBI Sequence Read Archive (SRA)☆31Jan 29, 2020Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 3 years ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 3 years ago
- Python module to read binary Plink files.☆18Mar 25, 2026Updated 4 months ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆183Mar 11, 2026Updated 5 months ago
- ☆16Jul 9, 2026Updated last month
- Software for linkage disequilibrium graphical models☆18Apr 6, 2025Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆40Jun 15, 2021Updated 5 years ago
- A pipeline for phasing UK Biobank whole genome sequence data☆19Mar 21, 2023Updated 3 years ago
- Automatised pipeline of ConsensuSV workflow.☆24Aug 23, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆17Mar 20, 2023Updated 3 years ago
- Benchmarking of aligners and variant callers for Whole Exome Sequencing data☆20Dec 4, 2018Updated 7 years ago
- ☆24Jan 7, 2026Updated 7 months ago
- Statistical properties of polygenic risk scores☆19Oct 16, 2019Updated 6 years ago
- Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…☆16Nov 22, 2022Updated 3 years ago
- ☆17Jul 19, 2024Updated 2 years ago
- My iTerm 2 configuration☆10Oct 31, 2021Updated 4 years ago