Alternatives and similar repositories for corncob

Users that are interested in corncob are comparing it to the libraries listed below

• adw96 / DivNet
  diversity estimation under ecological networks
  ☆84Updated last week
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆35Updated 5 years ago
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆124Updated 2 months ago
• adw96 / breakaway
  Species richness with high diversity
  ☆67Updated this week
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆38Updated 9 years ago
• vmikk / metagMisc
  Miscellaneous functions for metagenomic analysis.
  ☆50Updated 2 months ago
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated last month
• microbiome / mia
  Microbiome analysis
  ☆53Updated this week
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆116Updated last week
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆94Updated last month
• umerijaz / microbiomeSeq
  An R package for microbial community analysis in an environmental context
  ☆67Updated 4 years ago
• spholmes / F1000_workflow
  ☆43Updated 8 years ago
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆23Updated 2 months ago
• YuLab-SMU / treeio
  Base Classes and Functions for Phylogenetic Tree Input and Output
  ☆103Updated 3 months ago
• mikemc / speedyseq
  Speedy versions of phyloseq functions
  ☆48Updated last year
• yijuanhu / LDM-Archive
  Linear Decomposition Model
  ☆24Updated 2 years ago
• itsmisterbrown / microfiltR
  accessory functions for processing microbial community data
  ☆12Updated 2 years ago
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆28Updated 3 months ago
• ggloor / CoDaSeq
  Functions for compositional analysis of high throughput sequencing
  ☆29Updated last year
• Russel88 / DAtest
  Compare different differential abundance and expression methods
  ☆51Updated 3 years ago
• KasperSkytte / ampvis2
  Tools for visualising microbial community amplicon data
  ☆67Updated 3 months ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆70Updated 2 months ago
• knightlab-analyses / reference-frames
  ☆20Updated 5 years ago
• microsud / dysbiosisR
  The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures
  ☆15Updated 2 years ago
• stefpeschel / NetCoMi
  Network construction, analysis, and comparison for microbial compositional data
  ☆169Updated 4 months ago
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆31Updated last year
• nhanhocu / metamicrobiomeR
  An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…
  ☆34Updated 4 years ago
• sprouffske / growthcurver
  Growthcurver is an R package that fits growth curve data to a standard form of the logistic equation common in ecology and evolution whos…
  ☆48Updated 3 years ago
• mahendra-mariadassou / phyloseq-extended
  Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…
  ☆33Updated 5 months ago
• CharlieCarpenter / tidyMicro
  tidyMicro GitHup Repository
  ☆19Updated 3 years ago