Alternatives and similar repositories for propr

Users that are interested in propr are comparing it to the libraries listed below

• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆106Updated 6 months ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆74Updated 2 years ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆93Updated 3 weeks ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆116Updated this week
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆148Updated 3 months ago
• microbiome / mia
  Microbiome analysis
  ☆53Updated this week
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆125Updated last month
• loukesio / ggvolc
  𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …
  ☆65Updated last month
• adw96 / DivNet
  diversity estimation under ecological networks
  ☆83Updated 2 months ago
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆39Updated 9 years ago
• YuLab-SMU / treedata-book
  a complete reference book for treeio, tidytree and ggtree packages
  ☆104Updated 3 years ago
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆90Updated 2 years ago
• mhahsler / rBLAST
  Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package
  ☆112Updated 3 months ago
• markrobinsonuzh / TreeSummarizedExperiment
  An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension
  ☆14Updated 2 months ago
• mblstamps / stamps2019
  Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA
  ☆34Updated 5 years ago
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆120Updated 2 months ago
• js229 / Vennerable
  Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…
  ☆91Updated 4 years ago
• wejlab / animalcules
  R shiny app for interactive microbiome analysis
  ☆56Updated 4 months ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆72Updated 4 months ago
• Shians / Glimma
  Glimma R package
  ☆50Updated last year
• statdivlab / tinyvamp
  ☆19Updated 2 years ago
• cxli233 / customized_upset_plots
  Make customized upset plots: from raw data to plots
  ☆61Updated last month
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated 2 weeks ago
• Bioconductor / Biostrings
  Efficient manipulation of biological strings
  ☆65Updated 3 months ago
• ggloor / ALDEx_bioc
  ALDEx_bioc is the working directory for updating bioconductor
  ☆28Updated 5 months ago
• spholmes / F1000_workflow
  ☆43Updated 8 years ago
• adw96 / breakaway
  Species richness with high diversity
  ☆67Updated 2 months ago
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆31Updated 2 years ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago
• ggloor / CoDaSeq
  Functions for compositional analysis of high throughput sequencing
  ☆29Updated last year