brendankelly / micropower
power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
☆35Updated 8 years ago
Related projects ⓘ
Alternatives and complementary repositories for micropower
- Speedy versions of phyloseq functions☆46Updated 7 months ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆35Updated 5 years ago
- Miscellaneous functions for metagenomic analysis.☆46Updated 5 months ago
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆33Updated 4 years ago
- The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures☆13Updated last year
- Functions for compositional analysis of high throughput sequencing☆29Updated 11 months ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆29Updated last year
- A comprehensive and customizable R package for microbiome analysis.☆21Updated last year
- Simple R utilities for working with HMMER☆18Updated last month
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆69Updated 2 years ago
- Linear Decomposition Model☆24Updated last year
- diversity estimation under ecological networks☆83Updated last year
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆33Updated last year
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Updated 2 years ago
- [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data☆69Updated 3 weeks ago
- Compare different differential abundance and expression methods☆50Updated 2 years ago
- functions for analyzing phyloseq data☆26Updated 3 months ago
- accessory functions for processing microbial community data☆12Updated last year
- ☆21Updated 4 years ago
- ALDEx_bioc is the working directory for updating bioconductor☆27Updated 10 months ago
- A set of R functions that help faciliate a lot of tedious processing☆18Updated 6 years ago
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated last year
- ☆19Updated last year
- Ying's tools for analysis, with particular focus on microbiome data☆41Updated last week
- Species richness with high diversity☆68Updated 11 months ago
- Workshop for NGS'18 conference, Barcelona 2018☆25Updated 5 years ago
- ☆38Updated 7 years ago
- Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)☆18Updated 2 years ago
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆12Updated 5 years ago
- ☆26Updated 8 months ago