speciationgenomics / presentationsLinks
Presentations from the course
☆38Updated 2 years ago
Alternatives and similar repositories for presentations
Users that are interested in presentations are comparing it to the libraries listed below
Sorting:
- Tutorial about R package PopGenome☆43Updated 6 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆30Updated last month
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Repository for speciation genomics website☆26Updated last month
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- MSMC2 Scripts☆27Updated 2 weeks ago
- Quantifying Introgression via Branch Lengths☆54Updated 3 years ago
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆66Updated last year
- GONE: Scripts, programs and an example data set☆47Updated 2 months ago
- Topology weighting by iterative sampling of sub-trees☆81Updated 9 months ago
- Methods for examining PCA locally along the genome.☆83Updated last year
- Scripts for analysis used during the course☆92Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆63Updated 11 months ago
- RADseq workflow using STACKS☆59Updated last week
- Hybridization detection using phylogenetic invariants☆49Updated 11 months ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆37Updated last year
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆27Updated 7 years ago
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Infer demographic history with the Moran model☆48Updated 3 months ago
- Detecting natural selection from population-based genetic data☆27Updated 6 years ago
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆11Updated last year
- Tutorials on phylogenetic and phylogenomic inference☆49Updated 5 months ago
- Code to compute the XP-CLR statistic to infer natural selection☆98Updated 3 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- Pinpoints the mutation favored by selection☆34Updated 3 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- Useful bioinformatic scripts☆58Updated 10 months ago