speciationgenomics / presentationsLinks
Presentations from the course
☆38Updated 2 years ago
Alternatives and similar repositories for presentations
Users that are interested in presentations are comparing it to the libraries listed below
Sorting:
- Tutorial about R package PopGenome☆44Updated 6 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆31Updated 2 weeks ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- LDna: an R package to perform linkage disequilibrium network analysis☆31Updated last year
- Quantifying Introgression via Branch Lengths☆54Updated 3 years ago
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆67Updated last year
- Repository for speciation genomics website☆26Updated last month
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- MSMC2 Scripts☆27Updated last month
- GONE: Scripts, programs and an example data set☆47Updated 3 months ago
- Topology weighting by iterative sampling of sub-trees☆81Updated 9 months ago
- Methods for examining PCA locally along the genome.☆85Updated last year
- Hybridization detection using phylogenetic invariants☆50Updated last year
- RADseq workflow using STACKS☆59Updated last week
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆67Updated last week
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆27Updated 7 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆38Updated last year
- A pipeline that accepts a VCF file to run through Admixture☆63Updated 9 months ago
- Code used to analyse WGS data of giraffe in Coimbra et al. 2021☆12Updated 2 years ago
- Tutorial on using popular tools for learning about population history☆52Updated 7 years ago
- Scripts for analysis used during the course☆92Updated last year
- Tutorials on phylogenetic and phylogenomic inference☆49Updated 5 months ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- ☆24Updated 8 years ago
- Sex assignment through coverage☆20Updated 5 months ago
- Infer demographic history with the Moran model☆48Updated 4 months ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- Population genetics analyses from NGS data☆25Updated 4 years ago