rojaff / LanGen_pipeline

Related projects ⓘ

Alternatives and complementary repositories for LanGen_pipeline

• kristinmlee / dmc
  Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples
  ☆13Updated 5 years ago
• owensgl / haploblocks
  Scripts and resources for the haploblocks manuscript
  ☆14Updated 4 years ago
• melop / killigenomics
  Killifish genomics scripts
  ☆12Updated 3 years ago
• oeco28 / Cacao_Genomics
  This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes
  ☆11Updated 6 years ago
• biozzq / goat-population-genetic
  Main scripts and commands used to analyze goat population genetic and domestication
  ☆17Updated 5 years ago
• MorrellLAB / File_Conversions
  Scripts to convert between file formats for various analyses
  ☆14Updated 3 months ago
• Tom-Jenkins / utility_scripts
  Scripts for population genetics analysis
  ☆19Updated 2 years ago
• popgenome / lettuce2020
  Codes for the lettuce resequencing project in 2020
  ☆26Updated 3 years ago
• GenisGE / evalAdmix
  ☆12Updated 7 months ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 2 years ago
• hemstrow / snpR
  ☆28Updated 2 weeks ago
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆11Updated last month
• ThibaultLeroyFr / Intro2PopGenomics
  Leroy & Rougemont - “learning-by-doing” introduction to population genomics - scripts
  ☆17Updated 5 years ago
• GaoLei-bio / SV
  ☆14Updated 2 years ago
• mijangos81 / PopGenR
  Population Genomics in R workshop
  ☆12Updated 7 months ago
• therkildsen-lab / lcwgs-simulation
  ☆16Updated 2 years ago
• hewm2008 / VCF2Dis
  VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
  ☆27Updated 2 months ago
• simonhmartin / dfs
  D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum
  ☆15Updated 4 years ago
• alachins / sweed
  Likelihood-based Selective Sweep Detection
  ☆35Updated last year
• wheatgenetics / owwc
  repository for code used in analysis of open wild wheat consortium
  ☆15Updated 2 years ago
• evodify / genotype-files-manipulations
  Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.
  ☆10Updated 3 years ago
• clairemerot / physalia_adaptation_course
  ☆18Updated last year
• ZhaoTingzju / GWAS_script
  Working on cotton resequencing
  ☆11Updated 4 years ago
• guokai8 / CandiHap
  Build haplotye and generate figures
  ☆17Updated 3 years ago
• ZhangRenL / geneHapR
  ☆11Updated 2 months ago
• novikovalab / piawka
  The powerful `awk` script to calculate pi, Dxy and Fst in polyploid VCF files with mixed-ploidy groups support
  ☆24Updated this week
• guillemylla / Crickets_Genome_Annotation
  Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.
  ☆13Updated 2 years ago
• comery / Data-Visulization
  issues for semina "Data Visulization"
  ☆12Updated last year
• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆27Updated last year
• PhHermann / LDJump
  R Package to Estimate Variable Recombination Rates using Population Genetic Data
  ☆39Updated 5 years ago