Alternatives and similar repositories for nQuack

Users that are interested in nQuack are comparing it to the libraries listed below

• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆30Updated 2 months ago
• StevenMicheletti / poolparty
  Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R
  ☆21Updated 3 years ago
• esayyari / DiscoVista
  ☆40Updated last year
• Capblancq / RDA-landscape-genomics
  ☆31Updated 3 years ago
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆60Updated 8 months ago
• clairemerot / angsd_pipeline
  ☆26Updated 2 years ago
• sjoleary / SNPFILT
  ☆19Updated 7 years ago
• rapidspeciation / biodiversity_genomics_course
  biodiversity genomics course by Nicol Rueda, Karin Näsvall and Joana Meier from the Wellcome Sanger Institute
  ☆54Updated last month
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆26Updated 11 months ago
• RILAB / mop
  Simple tool for capturing alignment regions with sufficient quality for genotyping.
  ☆21Updated 3 years ago
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆35Updated last year
• miriammiyagi / QuIBL
  Quantifying Introgression via Branch Lengths
  ☆53Updated 2 years ago
• BenjaminPeter / rangeexpansion
  ☆13Updated 8 years ago
• enormandeau / stacks_workflow
  RADseq workflow using STACKS
  ☆58Updated last month
• meganlsmith / delimitR
  This repository contains the code and manual for the R package delimitR.
  ☆17Updated 3 years ago
• clairemerot / physalia_adaptation_course
  ☆18Updated 2 years ago
• mmatschiner / snapp_prep
  Prepare XML input files for divergence-time estimation with SNAPP
  ☆19Updated 2 years ago
• btmartin721 / raxml_ascbias
  Script for removing or counting invariant sites for the RAxML ascertainment bias corrections
  ☆15Updated 9 months ago
• jasonleebrown / UCE_phyluce_pipeline
  UCE Bioinformatics Pipeline
  ☆16Updated 7 months ago
• esrud / GONE
  GONE: Scripts, programs and an example data set
  ☆48Updated last year
• mmollina / MAPpoly
  Genetic maps in autopolyploids
  ☆29Updated last month
• ForBioPhylogenomics / tutorials
  Tutorials on phylogenomic analyses for the ForBio Phylogenomics course
  ☆37Updated last year
• ranwez / MACSE_V2_PIPELINES
  This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…
  ☆34Updated last year
• simonhmartin / twisst
  Topology weighting by iterative sampling of sub-trees
  ☆79Updated 6 months ago
• popgenDK / SATC
  Sex assignment through coverage
  ☆18Updated last month
• millanek / fineRADstructure
  A package for population structure inference from RAD-seq data
  ☆33Updated 4 years ago
• mfoll / BayeScan
  Detecting natural selection from population-based genetic data
  ☆27Updated 6 years ago
• thierrygosselin / assigner
  Population assignment analysis using R
  ☆17Updated 2 weeks ago
• FerRacimo / GRoSS
  Graph-aware Retrieval of Selective Sweeps
  ☆21Updated 10 months ago
• shenglin-liu / vcf2sfs
  R functions for generating site frequency spectra (SFS) from a VCF file.
  ☆28Updated 5 years ago