spacetx-spacejam / data
data for spacejam2
☆17Updated 2 years ago
Alternatives and similar repositories for data:
Users that are interested in data are comparing it to the libraries listed below
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 7 months ago
- ☆37Updated 2 months ago
- ☆48Updated 3 years ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated last year
- Bayesian Analytics for Spatial Segmentation☆23Updated 4 months ago
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆30Updated this week
- ☆45Updated 2 years ago
- Spatial direct messaging detected by bivariate Moran☆25Updated last month
- Sub-cellular spatial transcriptomics Cell Segmentation☆60Updated last year
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆39Updated 3 years ago
- Code used to benchmark Xenium☆43Updated 7 months ago
- ☆44Updated 4 months ago
- ☆18Updated last month
- A probabilistic cell typing algorithm for spatial transcriptomics.☆23Updated this week
- Interoperability between SpatialData and the Xenium Explorer☆18Updated 6 months ago
- Python tool for alignment of spatial transcriptomics (ST) data using diffeomorphic metric mapping☆71Updated last year
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆38Updated 7 months ago
- A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.☆106Updated this week
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated last year
- ☆14Updated 2 years ago
- ☆34Updated 10 months ago
- A Python toolkit for subcellular analysis of spatial transcriptomics data☆74Updated last month
- ☆37Updated 2 years ago
- CellLENS: Cross-domain information fusion for enhanced cell population delineation in single-cell spatial-omics data☆14Updated this week
- Spatial Transcriptomics Algorithm Reconstructing Copy-number Heterogeneity☆23Updated 6 months ago
- ClusterMap for multi-scale clustering analysis of spatial gene expression☆43Updated 7 months ago
- Super-resolved spatial transcriptomics by deep data fusion☆70Updated last year
- Automate unsupervised machine learning cell type identification using both protein expressions and cell spatial neighborhood information …☆31Updated 9 months ago
- End-to-end analysis of spatial multi-omics data☆39Updated this week
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆30Updated 2 weeks ago