Alternatives and similar repositories for stMVC

Users that are interested in stMVC are comparing it to the libraries listed below

• sunyolo / DeepTFni
  A VGAE-based model to infer transcription factor regulatory network
  ☆28Updated 3 years ago
• xiaoyeye / CCST
  Cell clustering for spatial transcriptomics data with graph neural network
  ☆64Updated 2 years ago
• OSU-BMBL / deepmaps
  Single-cell biological network inference using a heterogeneous graph transformer
  ☆76Updated 9 months ago
• HantaoShu / DeepSEM
  ☆86Updated 2 years ago
• melobio / Concerto-reproducibility
  ☆40Updated 2 years ago
• zhanglab-wbgcas / STGRNS
  ☆31Updated 2 years ago
• TencentAILabHealthcare / scTranslator
  ☆62Updated 3 months ago
• JinmiaoChenLab / SpatialGlue
  SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.
  ☆73Updated last year
• TencentAILabHealthcare / scPROTEIN
  ☆55Updated 11 months ago
• kakarotcq / Con-AAE
  ☆12Updated 2 years ago
• QSong-github / scGCN
  scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
  ☆41Updated 3 years ago
• zpliulab / GENELink
  ☆35Updated 3 years ago
• HelloWorldLTY / UKBioLM
  ☆22Updated 7 months ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆57Updated last year
• JinmiaoChenLab / GraphST
  ☆138Updated last year
• JackieHanLab / TOSICA
  Transformer for One-Stop Interpretable Cell-type Annotation
  ☆145Updated last year
• ml4bio / CLEAR
  CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis
  ☆35Updated 3 years ago
• QIFEIDKN / STAGATE
  Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
  ☆48Updated 2 years ago
• yuanzhiyuan / SODB_analysis
  ☆12Updated 2 years ago
• JiangBioLab / DeepST
  Identify spatial domain
  ☆86Updated 6 months ago
• drieslab / spatial-datasets
  overview of spatial datasets
  ☆76Updated last year
• labomics / midas
  PyTorch implementation of the MIDAS algorithm for single-cell multimodal data integration (Nature Biotechnology 2024).
  ☆61Updated 3 months ago
• Lifoof / MoGCN
  Multi-omics integration method using AE and GCN
  ☆38Updated 2 years ago
• zhanglabtools / STAGATE
  Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
  ☆77Updated 3 years ago
• lulab / Pathformer
  Pathformer: biological pathway informed transformer model
  ☆35Updated last year
• yuzhenmao / ScRAT
  Implementation of Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).
  ☆13Updated last year
• ZJUFanLab / scDeepSort
  Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network
  ☆106Updated 2 years ago
• QIFEIDKN / STAGATE_pyG
  Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…
  ☆61Updated 2 years ago
• RasmussenLab / MOVE
  MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
  ☆89Updated last year
• lanagarmire / Asgard
  ☆44Updated last year