Single-cell data analysis
☆16May 24, 2026Updated 2 months ago
Alternatives and similar repositories for scbean
Users that are interested in scbean are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- data for spacejam2☆18Aug 3, 2022Updated 4 years ago
- Multiplexed data-independent acquisition (plexDIA) for increasing proteomics throughput. The code is distributed by an MIT license.☆11Mar 17, 2025Updated last year
- ☆12May 24, 2024Updated 2 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Jul 13, 2023Updated 3 years ago
- Dynamical information enables inference of gene regulation at single-cell scale☆12Jun 9, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Supervised cell type identification for scATAC-seq data☆15Aug 23, 2023Updated 2 years ago
- R tool to analyse and integrate multiple -omics data☆16Jan 4, 2026Updated 7 months ago
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Jan 18, 2019Updated 7 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- Integrative analysis for scRNA-seq and scTCR-/scBCR-seq data☆22Updated this week
- ☆49Oct 29, 2025Updated 9 months ago
- MorphLink: Bridging Cellular Morphological Behaviors and Molecular Dynamics in Multi-modal Spatial Omics☆18Dec 7, 2025Updated 8 months ago
- SCOUP is a probabilistic model to analyze single-cell expression data during differentiation☆10Apr 20, 2017Updated 9 years ago
- ☆14Jul 9, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆27Feb 22, 2025Updated last year
- ☆12Apr 3, 2023Updated 3 years ago
- ☆47Jul 24, 2025Updated last year
- ☆11Sep 7, 2023Updated 2 years ago
- ☆25Jun 6, 2025Updated last year
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Sep 18, 2019Updated 6 years ago
- ☆12Aug 16, 2022Updated 3 years ago
- ☆17Mar 7, 2025Updated last year
- Analysis and visualization of RNA-Seq results☆33Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Single Cell RNA-seq UMI Filtering Facilitator☆10Oct 6, 2025Updated 10 months ago
- ☆27Jun 27, 2026Updated last month
- ☆15Jun 17, 2026Updated last month
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆16Apr 13, 2021Updated 5 years ago
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆25May 16, 2025Updated last year
- Single-cell spatial elucidation through image-augmented graph transformer☆32Jul 7, 2023Updated 3 years ago
- PARM: Promoter Activity Regulatory Model☆25Jul 27, 2026Updated 2 weeks ago
- A Julia package for fitting VAEs to single-cell data using count distributions.☆26Feb 16, 2026Updated 6 months ago
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆54Jul 13, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Interactive Protein Sequence VIsualization/Viewer - Interactive Circos☆11Jun 5, 2026Updated 2 months ago
- Detection of structural variants in cancer mate-pair and paired-end data☆13May 3, 2019Updated 7 years ago
- metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation☆13May 29, 2024Updated 2 years ago
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- robust matching of small variant datasets using flexible scoring schemes☆12Mar 26, 2020Updated 6 years ago
- ☆63Jul 23, 2024Updated 2 years ago
- ☆27May 22, 2025Updated last year