Su-informatics-lab / DSTG
Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
☆34Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for DSTG
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆31Updated last year
- Reproducing result from the paper☆33Updated 3 years ago
- ☆44Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆28Updated 4 months ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆37Updated 2 months ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆62Updated last week
- Additional code and analysis from the single-cell integration benchmarking project☆55Updated last year
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆38Updated 3 years ago
- ☆36Updated this week
- Imputation method for scRNA-seq based on low-rank approximation☆73Updated 11 months ago
- Single cell omics biology annotations☆48Updated 2 months ago
- overview of spatial datasets☆69Updated 9 months ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆40Updated 2 years ago
- Gene group activity utility functions for Scanpy☆56Updated 3 months ago
- scLearn：Learning for single cell assignment☆34Updated last year
- ☆28Updated 2 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆60Updated 6 months ago
- Spatial direct messaging detected by bivariate Moran☆24Updated last week
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆28Updated 4 years ago
- ☆79Updated last week
- CeLEry: cell location recovery in single-cell RNA sequencing☆31Updated 6 months ago
- domain adaptation of spatial and single-cell transcriptome☆24Updated 2 months ago
- Spatial Cellular Estimator for Tumors☆42Updated this week
- Python package to find communication-driven intercellular flows from single-cell RNA-sequencing and spatial transcriptomics data.☆56Updated last month
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆26Updated 10 months ago
- ☆49Updated 3 months ago
- ☆29Updated 10 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆86Updated last week
- SPROD: Spatial expression profiling de-noising☆33Updated last year
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆48Updated 3 months ago