Su-informatics-lab / DSTG
Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
☆38Updated 2 years ago
Alternatives and similar repositories for DSTG:
Users that are interested in DSTG are comparing it to the libraries listed below
- Additional code and analysis from the single-cell integration benchmarking project☆59Updated 2 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆40Updated last year
- Reproducing result from the paper☆33Updated 3 years ago
- overview of spatial datasets☆71Updated last year
- ☆42Updated 3 weeks ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆66Updated 2 months ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆41Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 8 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆51Updated 9 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆35Updated 11 months ago
- ☆41Updated last year
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆52Updated 8 months ago
- domain adaptation of spatial and single-cell transcriptome☆26Updated 6 months ago
- Spatial direct messaging detected by bivariate Moran☆25Updated 2 months ago
- Reproducing the experiments of the DestVI paper☆18Updated 3 years ago
- ☆29Updated last year
- ☆45Updated 2 years ago
- Cell clustering for spatial transcriptomics data with graph neural network☆59Updated last year
- ☆55Updated 8 months ago
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆40Updated 3 years ago
- ☆96Updated 2 months ago
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆29Updated 4 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆30Updated 2 years ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- End-to-end analysis of spatial multi-omics data☆55Updated this week
- ☆57Updated last year
- ☆29Updated last month
- ☆47Updated last year
- SPROD: Spatial expression profiling de-noising☆36Updated last year