coongroup / IPSALinks
The Interactive Peptide Spectral Annotator
☆20Updated 5 years ago
Alternatives and similar repositories for IPSA
Users that are interested in IPSA are comparing it to the libraries listed below
Sorting:
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 8 months ago
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆49Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated last month
- Python client for PRIDE Archive Rest API.☆26Updated 3 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated last month
- ☆66Updated last year
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated last month
- A python package for fast post translational modification localization, powered by Cython.☆20Updated last year
- ProXL Web App -- Visualize and Share Protein Cross-linking Data☆13Updated 2 weeks ago
- Python package for investigating the structural context of PTMs☆28Updated 10 months ago
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Updated 3 years ago
- A Python interface to proteomics data repositories☆35Updated 5 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆64Updated this week
- Spectral library searching using approximate nearest neighbor techniques.☆46Updated 6 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated this week
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆58Updated 2 months ago
- ☆24Updated 2 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆30Updated 11 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated 8 months ago
- ☆28Updated 6 months ago
- ☆13Updated last year
- asari, metabolomics data preprocessing☆55Updated 3 weeks ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆14Updated 3 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆22Updated 3 months ago
- Community-curated tutorials and datasets for ML in proteomics☆55Updated 2 weeks ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆60Updated this week
- Report processing and protein quantification for MS-based proteomics☆49Updated 2 years ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆65Updated 2 years ago
- A reporting pipeline for visualization of immunopeptidomics MS data.☆15Updated 3 years ago