The Interactive Peptide Spectral Annotator
☆23Jun 9, 2020Updated 5 years ago
Alternatives and similar repositories for IPSA
Users that are interested in IPSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- QUANtification by Distillation for ENhanced Signals with Error Regulation☆10Aug 20, 2022Updated 3 years ago
- Confidence Estimation for Mass Spectrometry Proteomics☆14May 28, 2025Updated 11 months ago
- A Comet-based, best practices proteomics pipeline.☆39Mar 21, 2024Updated 2 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Apr 13, 2026Updated last month
- Fast and flexible semi-supervised learning for peptide detection in Python☆51Feb 27, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ProXL Web App -- Visualize and Share Protein Cross-linking Data☆13May 19, 2026Updated last week
- Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package☆37May 1, 2024Updated 2 years ago
- A list of tools on proteomics using deep learning☆108May 14, 2026Updated last week
- A python package for fast post translational modification localization, powered by Cython.☆20Dec 15, 2023Updated 2 years ago
- Post Translational Modification (PTM) Significance Analysis in shotgun mass spectrometry-based proteomic experiments☆14Apr 29, 2026Updated 3 weeks ago
- Peptide Correlation analysis☆11Oct 3, 2024Updated last year
- Python package for efficient mass spectrometry data processing and visualization☆169Mar 5, 2026Updated 2 months ago
- Proteomics Toolset for Integrative Data Analysis☆26Oct 7, 2025Updated 7 months ago
- Proteomics search & quantification so fast that it feels like magic☆289May 8, 2026Updated 2 weeks ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆12Jun 13, 2024Updated last year
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆33Nov 24, 2024Updated last year
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆24Apr 8, 2026Updated last month
- A community dedicated to education of computer coding applied to mass spectrometry applications.☆52Jul 18, 2025Updated 10 months ago
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆13Mar 13, 2022Updated 4 years ago
- A deep learning toolkit for mass spectrometry☆91Jan 7, 2026Updated 4 months ago
- MSConnect is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.☆18Aug 19, 2025Updated 9 months ago
- Access Orbitrap data in R lang using C# .NET assembly - bioconductor package☆61Feb 10, 2026Updated 3 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54May 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆33Mar 21, 2026Updated 2 months ago
- ☆16Oct 3, 2023Updated 2 years ago
- Quantitative proteomics workflow☆16Sep 30, 2022Updated 3 years ago
- A Rust library for peptide centric mass spec calculations centered around PSI standards and handling complex cases robustly☆48Updated this week
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆28Aug 16, 2023Updated 2 years ago
- A comprehensive R package for label-free proteomics data analysis and modeling☆16May 7, 2026Updated 2 weeks ago
- Methods for label-free mass spectrometry proteomics☆15May 13, 2026Updated last week
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆44May 9, 2026Updated 2 weeks ago
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆127Apr 19, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Post-processing peptide de novo sequences to improve their accuracy☆10Nov 29, 2022Updated 3 years ago
- ☆15Jan 19, 2018Updated 8 years ago
- Fundamental functions, annotation pipeline and constants for oktoberfest☆13May 12, 2026Updated 2 weeks ago
- This is a R package for alignment of DIA mass-spec data☆12Jan 31, 2026Updated 3 months ago
- Interpretation of proteomics identification results☆55May 8, 2026Updated 2 weeks ago
- Tools for treatment high res mass spectrum of natural organic matter samples☆12Aug 4, 2023Updated 2 years ago
- Imputing proteomics data using deep learning models☆34May 20, 2026Updated last week