Platform independent command line tool for analysis of mass spectrometry data.
☆15Dec 26, 2022Updated 3 years ago
Alternatives and similar repositories for pyquant
Users that are interested in pyquant are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML☆26Aug 8, 2026Updated 3 weeks ago
- A library to assist with a variety of -omic analyses. Included are tools for proteomics, transcriptomics, and genomics.☆16Aug 3, 2023Updated 3 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆25Updated this week
- Peptide Correlation analysis☆13Oct 3, 2024Updated last year
- Convert MSP files into a database☆10May 4, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆10Nov 22, 2024Updated last year
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆25Aug 19, 2026Updated last week
- Synthetic mzML writer☆14Mar 10, 2025Updated last year
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆19May 12, 2023Updated 3 years ago
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 6 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆24Apr 17, 2026Updated 4 months ago
- Polymer element for the plotly.js library☆20Apr 26, 2018Updated 8 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Jul 13, 2018Updated 8 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆52Aug 5, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A python package for fast post translational modification localization, powered by Cython.☆21Dec 15, 2023Updated 2 years ago
- Repository of the integrated mouse gut metagenomic catalog☆20Mar 14, 2022Updated 4 years ago
- A home internet server configuration for the BeagleBone Black, Raspberry Pi or Cubieboard☆10Jun 16, 2014Updated 12 years ago
- Sparse matrix spy plot and sparkline renderer.☆19Nov 18, 2024Updated last year
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Aug 19, 2026Updated last week
- pymzML - an interface between Python and mzML Mass spectrometry Files☆196Updated this week
- Modular and user-friendly platform for AI-assisted rescoring of peptide identifications☆67Aug 1, 2026Updated 3 weeks ago
- Plotting utilities for mass spectrometry data☆10Jun 25, 2026Updated 2 months ago
- ☆14Jan 7, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆31Jul 16, 2026Updated last month
- ☆11Oct 8, 2021Updated 4 years ago
- A mass spectrometry package for Julia☆12Jul 22, 2026Updated last month
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12May 4, 2019Updated 7 years ago
- The Multiplierz Proteomics Library☆24Apr 27, 2024Updated 2 years ago
- ☆18Jul 9, 2018Updated 8 years ago
- A series of python scripts which aid in the processing and interpretation of mass spectrometric data (formerly Mass-Spec-Python-Tools)☆39May 7, 2020Updated 6 years ago
- This project is created by the Hao Lab at the Department of Chemistry & Biochemistry, University of Maryland, College Park, MD. This proj…☆36Jul 3, 2026Updated last month
- Visual Molecular Dynamics in Docker Container☆12Jan 1, 2015Updated 11 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆33Mar 27, 2026Updated 5 months ago
- Organic/biological mass spectrometry data analysis (development version).☆33Jan 27, 2026Updated 7 months ago
- This converts an assortment of python command line interfaces into a language agnostic build spec for usage in GUI creation.☆21Apr 10, 2026Updated 4 months ago
- Reporting and exchange format for mass spectrometry quality control data☆33Aug 23, 2026Updated last week
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- A modular JavaScript viewer for mass spectrometry data☆12May 20, 2022Updated 4 years ago
- mutation testing for R☆17Nov 11, 2024Updated last year