Alternatives and similar repositories for batmass:

Users that are interested in batmass are comparing it to the libraries listed below

• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆45Updated last month
• mafreitas / tdf2mzml
  ☆25Updated last year
• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆19Updated 2 months ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• statisticalbiotechnology / diffacto
  ☆13Updated 10 months ago
• thermofisherlsms / RawFileReader
  ☆53Updated 3 months ago
• UWPR / Comet
  An tandem mass spectrometry (MS/MS) sequence database search tool.
  ☆46Updated this week
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆64Updated last year
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆35Updated 2 weeks ago
• Nesvilab / PTM-Shepherd
  A tool for summarizing open search results
  ☆15Updated last month
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆21Updated 3 weeks ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 years ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆43Updated 2 years ago
• HUPO-PSI / mzTab
  mzTab Reporting MS-based Proteomics and Metabolomics Results
  ☆39Updated 2 months ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 7 months ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆34Updated 2 weeks ago
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆69Updated 3 years ago
• PNNL-Comp-Mass-Spec / Thermo-Raw-File-Reader
  .NET DLL wrapper for reading Thermo .Raw files. Uses ThermoFisher.CommonCore NuGet packages provided by Thermo Fisher Scientific
  ☆38Updated 4 months ago
• msproteomicstools / msproteomicstools
  Some hopefully useful tools for mass spectrometry applied to proteomics
  ☆52Updated 3 years ago
• HUPO-PSI / mzIdentML
  Repository for mzIdentML and the corresponding examples
  ☆23Updated 7 months ago
• gtluu / timsconvert
  ☆35Updated this week
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆44Updated last week
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆11Updated 3 weeks ago
• Proteobench / ProteoBench
  ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…
  ☆43Updated this week
• msdk / msdk
  MSDK source code repository
  ☆39Updated 2 years ago
• bigbio / proteomics-sample-metadata
  The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
  ☆80Updated 3 months ago
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated last month
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆44Updated last week
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆29Updated this week
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆43Updated last month