Alternatives and similar repositories for LCMSMethods

Users that are interested in LCMSMethods are comparing it to the libraries listed below

• statisticalbiotechnology / diffacto
  ☆13Updated last year
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆47Updated 4 months ago
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆19Updated last year
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆44Updated 3 months ago
• tvpham / iq
  An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics
  ☆31Updated 3 months ago
• CompOmics / DeepLC
  DeepLC: Retention time prediction for (modified) peptides using Deep Learning.
  ☆65Updated 3 weeks ago
• levitsky / identipy
  ☆10Updated 8 months ago
• MannLabs / alphamap
  An open-source Python package for the visual annotation of proteomics data with sequence specific knowledge.
  ☆82Updated 3 months ago
• mafreitas / tdf2mzml
  ☆26Updated last year
• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆21Updated 2 months ago
• pFindStudio / pGlyco3
  ☆20Updated 4 months ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆43Updated this week
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆48Updated last week
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 5 months ago
• wilhelm-lab / koina
  Democratizing ML in proteomics
  ☆37Updated last week
• abdrakhimov1 / Biosaur
  ☆14Updated 3 years ago
• MatteoLacki / timspy
  ☆20Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆44Updated 3 months ago
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆24Updated last month
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆64Updated 2 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆25Updated 2 months ago
• statisticalbiotechnology / maracluster
  Matthew The's implementation of MaRaCluster
  ☆11Updated 2 years ago
• gtluu / timsconvert
  ☆37Updated 3 months ago
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 4 years ago
• MannLabs / directlfq
  Fast and accurate label-free quantification for small and very large numbers of proteomes
  ☆58Updated 2 months ago
• Protea-Glycosciences / GlyCombo
  GlyCombo, a combinatorial glycan composition assignment tool
  ☆12Updated 4 months ago
• markmipt / ms1searchpy
  ☆10Updated last week
• MannLabs / alphadia
  modular & open DIA search
  ☆72Updated 2 weeks ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆44Updated 2 years ago
• grosenberger / easypqp
  EasyPQP: Simple library generation for OpenSWATH
  ☆11Updated 2 months ago