CompOmics / moFFLinks
 A modest Feature Finder (moFF) to extract  MS1 intensities from Thermo raw file
☆33Updated 4 years ago
Alternatives and similar repositories for moFF
Users that are interested in moFF are comparing it to the libraries listed below
Sorting:
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 4 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆48Updated 8 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last week
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 3 weeks ago
- ☆24Updated 2 years ago
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆96Updated last month
- ☆66Updated last year
- A Python interface to proteomics data repositories☆35Updated 4 months ago
- ☆55Updated 4 years ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆65Updated 2 years ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆27Updated 11 months ago
- ☆13Updated last year
- PDV: an integrative proteomics data viewer☆57Updated 3 months ago
- Interpretation of proteomics identification results☆52Updated 2 months ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated 7 months ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆42Updated 3 weeks ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated 2 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- PIA - Protein Inference Algorithms☆24Updated last week
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆102Updated last week
- Thermo MSFileReader Python bindings☆69Updated 4 years ago
- pathway and network analysis for metabolomics☆42Updated last year
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 2 weeks ago
- mzTab Reporting MS-based Proteomics and Metabolomics Results☆43Updated 6 months ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- DeepMass is a suite of tools to enable mass spectrometry data analysis using modern machine learning techniques.☆51Updated 3 years ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆54Updated this week
- Python client for PRIDE Archive Rest API.☆24Updated last week
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆22Updated 3 months ago
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago