A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
☆34Apr 19, 2021Updated 5 years ago
Alternatives and similar repositories for moFF
Users that are interested in moFF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Mar 19, 2024Updated 2 years ago
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆26Oct 15, 2026Updated 2 weeks ago
- The Git Account of LCMSMethods.org☆11Jun 1, 2019Updated 7 years ago
- A tool integrates channel abundances from multiple TMT samples and exports a general report for downstream analysis.☆16Oct 23, 2026Updated last week
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Jun 27, 2022Updated 4 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆51Jul 13, 2026Updated 3 months ago
- AutoRT: Peptide retention time prediction using deep learning☆32Jul 31, 2024Updated 2 years ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆110Updated this week
- Automatically exported from code.google.com/p/kojak-ms☆13Apr 11, 2025Updated last year
- Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful fo…☆91Aug 17, 2023Updated 3 years ago
- Lorikeet is a JQuery plugin to view MS/MS spectra annotated with fragment ions.☆19Sep 7, 2023Updated 3 years ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆26Aug 19, 2026Updated 2 months ago
- MS/MS prediction for peptides☆25Dec 18, 2020Updated 5 years ago
- A label free quantification tool.☆20Jan 13, 2026Updated 9 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Deep proteome inference from peptide profiles☆14Jul 16, 2020Updated 6 years ago
- Visualizing and Analyzing Mass Spectrometry Related Data in Proteomics☆12Jun 3, 2025Updated last year
- Graphical user interface for the ThermoRawFileParser☆26Jul 5, 2024Updated 2 years ago
- Robust statistical inference for quantitative LC-MS proteomics☆35Dec 6, 2022Updated 3 years ago
- Protein Identification with Deep Learning☆104Nov 27, 2020Updated 5 years ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Oct 11, 2026Updated 3 weeks ago
- PIA - Protein Inference Algorithms☆27Aug 13, 2026Updated 2 months ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆53Sep 1, 2026Updated 2 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆84Mar 26, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DeepLC: Retention time prediction for peptides carrying any modification.☆81Oct 25, 2026Updated last week
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆133Oct 22, 2026Updated last week
- Repository for mzIdentML and the corresponding examples☆27Oct 19, 2026Updated 2 weeks ago
- Interpretation of proteomics identification results☆57Sep 28, 2026Updated last month
- A python interface to the SAGE search engine for mass spectrometry proteomics☆15Oct 7, 2026Updated 3 weeks ago
- Morpheus mass spectrometry–based proteomics database search algorithm☆22Jul 25, 2024Updated 2 years ago
- An extension of the ProteoWizard framework enabling the support of the mzDB format☆14Feb 12, 2021Updated 5 years ago
- MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics☆15Aug 25, 2022Updated 4 years ago
- ☆17Oct 22, 2026Updated last week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Spectral library searching using approximate nearest neighbor techniques.☆52Feb 11, 2026Updated 8 months ago
- Base Classes and Functions for Mass Spectrometry and Proteomics☆141Oct 5, 2026Updated 3 weeks ago
- Some hopefully useful tools for mass spectrometry applied to proteomics☆54Oct 12, 2021Updated 5 years ago
- Top down / bottom up, MS/MS analysis tool for DDA and DIA mass spectrometry data☆32Oct 5, 2022Updated 4 years ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆32Jul 16, 2026Updated 3 months ago
- Convert ThermoFinningan RAW mass spectrometry files to the mzXML format☆17Nov 8, 2023Updated 2 years ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆46Updated this week