CompOmics / moFFLinks
A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file
☆33Updated 4 years ago
Alternatives and similar repositories for moFF
Users that are interested in moFF are comparing it to the libraries listed below
Sorting:
- Some hopefully useful tools for mass spectrometry applied to proteomics☆53Updated 4 years ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆49Updated 9 months ago
- The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code☆24Updated 2 months ago
- ☆13Updated last year
- The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets☆98Updated 2 months ago
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆66Updated 2 years ago
- ☆24Updated 2 years ago
- PIA - Protein Inference Algorithms☆24Updated last month
- ☆67Updated last year
- ☆55Updated 4 years ago
- A Python interface to proteomics data repositories☆36Updated 5 months ago
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆53Updated last week
- PDV: an integrative proteomics data viewer☆58Updated 5 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆81Updated last month
- Python package for investigating the structural context of PTMs☆28Updated 11 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆32Updated last month
- Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics☆22Updated 4 months ago
- Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.☆45Updated 3 years ago
- Interpretation of proteomics identification results☆53Updated 2 weeks ago
- Ursgal - universal Python module combining common bottom-up proteomics tools for large-scale analysis☆43Updated 3 weeks ago
- TimsR: Easy access to timsTOF Pro data from R.☆12Updated 4 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆47Updated this week
- MS/MS prediction for peptides☆24Updated 4 years ago
- Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities☆104Updated 2 weeks ago
- Spectral library searching using approximate nearest neighbor techniques.☆47Updated 7 months ago
- Ultrafast, comprehensive peptide identification for mass spectrometry–based proteomics☆123Updated 5 months ago
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆31Updated last year
- PeptideProphet, PTMProphet, ProteinProphet, iProphet, Abacus, and FDR filtering☆121Updated last week
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago