Alternatives and similar repositories for jsms

Users that are interested in jsms are comparing it to the libraries listed below

• Roestlab / DIAlignR
  This is a R package for alignment of DIA mass-spec data
  ☆12Updated 4 years ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆34Updated 3 months ago
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• YasinEl / mzRAPP
  Tool for reliability assessment of omics peprocessing
  ☆10Updated last year
• yeastrc / proxl-web-app
  ProXL Web App -- Visualize and Share Protein Cross-linking Data
  ☆12Updated 10 months ago
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆17Updated 2 months ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆44Updated 3 months ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆18Updated last year
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆20Updated 11 months ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆14Updated 8 years ago
• ablab / npdtools
  Natural Product Discovery tools -- a toolkit containing various pipelines for in silico analysis of natural product mass spectrometry da…
  ☆28Updated 2 years ago
• secimTools / SECIMTools
  A set of metabolomics tools for use in Galaxy
  ☆11Updated 2 years ago
• SimpleNumber / HUMOS
  HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …
  ☆11Updated 2 months ago
• MannLabs / structuremap
  Python package for investigating the structural context of PTMs
  ☆28Updated 4 months ago
• mciach / masserstein
  Tools for analysis of Mass Spectrometry data using the Wasserstein metric
  ☆17Updated 6 months ago
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆19Updated last year
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆31Updated 2 years ago
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• bittremieux-lab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆25Updated last year
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• Rappsilber-Laboratory / XiSearch
  XiSearch
  ☆11Updated 3 weeks ago
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆31Updated last week
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 4 years ago