Alternatives and similar repositories for jsms:

Users that are interested in jsms are comparing it to the libraries listed below

• Roestlab / DIAlignR
  This is a R package for alignment of DIA mass-spec data
  ☆12Updated 4 years ago
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 9 months ago
• rformassspectrometry / MsCoreUtils
  Core Utils for Mass Spectrometry Data
  ☆16Updated last week
• secimTools / SECIMTools
  A set of metabolomics tools for use in Galaxy
  ☆11Updated 2 years ago
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• yeastrc / proxl-web-app
  ProXL Web App -- Visualize and Share Protein Cross-linking Data
  ☆12Updated 8 months ago
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆14Updated 7 years ago
• OpenMS / OpenMS-Tutorials
  Tutorials as used in the user meetings. (Please assign a git tag for the revision used for the UM)
  ☆13Updated 2 months ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆34Updated 3 weeks ago
• mciach / masserstein
  Tools for analysis of Mass Spectrometry data using the Wasserstein metric
  ☆17Updated 4 months ago
• kentsisresearchgroup / UltraQuant
  MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters
  ☆26Updated 6 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• statisticalbiotechnology / diffacto
  ☆13Updated last year
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆19Updated last year
• markmipt / ms1searchpy
  ☆10Updated last week
• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆15Updated 10 months ago
• HUPO-PSI / psi-ms-CV
  HUPO-PSI mass spectrometry CV
  ☆30Updated last month
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆19Updated last year
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated 10 months ago
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆21Updated 2 weeks ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• Viant-Metabolomics / Galaxy-M
  Metabolomics Tools for Galaxy
  ☆21Updated 8 years ago
• mandelbrot-project / memo
  Ms2 basEd saMple vectOrization (memo) package
  ☆17Updated last year
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆40Updated 10 months ago
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• bigbio / quantms
  Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…
  ☆41Updated this week
• vsegurar / DeepMSPeptide
  ☆16Updated 5 years ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• msdk / msdk
  MSDK source code repository
  ☆39Updated 2 years ago