stephaniehicks / methylCCLinks
R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
☆18Updated last month
Alternatives and similar repositories for methylCC
Users that are interested in methylCC are comparing it to the libraries listed below
Sorting:
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Explore the cancer relevance of your gene list☆52Updated 3 weeks ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 6 years ago
- Pairwise Hierarchical Model☆20Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 5 years ago
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated last month
- countsimQC - Compare characteristic features of count data sets☆29Updated 2 months ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 7 years ago
- Sample code for ldsc analyses in UKBB☆32Updated 2 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- GWAS gold standards repository☆39Updated 2 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 3 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Collection of R functions used in the Hochwagen Lab☆12Updated 5 months ago
- Materials presented at the BiocNYC meet-up☆12Updated 7 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated last month
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Updated last year
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 7 years ago
- scover☆24Updated 2 years ago
- ☆17Updated last year
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago