R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
☆18Nov 26, 2025Updated 5 months ago
Alternatives and similar repositories for methylCC
Users that are interested in methylCC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Impute DNA methylation from WGBS data.☆11Apr 23, 2019Updated 7 years ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15Apr 16, 2025Updated last year
- Detection of super-enhancers in cancer data☆21Apr 10, 2023Updated 3 years ago
- Interface to 10x Genomics' 1.3 m single cell data set☆19Aug 2, 2018Updated 7 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Oct 2, 2014Updated 11 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆17Apr 16, 2026Updated 2 weeks ago
- ClusterMap is an R package to analyze and compare two or more single cell expression datasets.☆21Jan 17, 2023Updated 3 years ago
- ☆14May 12, 2023Updated 2 years ago
- ☆10Jan 8, 2018Updated 8 years ago
- An end-to-end computational pipeline for large Perturb-seq screens☆15Apr 25, 2025Updated last year
- Learning gene-specific regulatory elements from epigenetic data☆11May 7, 2025Updated 11 months ago
- Spatial Image Analysis of Tissues☆15Dec 8, 2022Updated 3 years ago
- A toolset to analyze genomic footprinting data☆20Dec 5, 2025Updated 4 months ago
- Predicting regulatory DNA elements based on epigenomic signatures☆30Jun 26, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Code used for the single-cell RNA-Seq batch effects paper☆11Sep 25, 2017Updated 8 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- Targeted and non-targeted anticancer drugs and drug regimens☆30Mar 23, 2026Updated last month
- ShinyLearner: a software framework for performing benchmarks of machine-learning classification algorithms☆18Dec 15, 2021Updated 4 years ago
- workshop platform provider for running docker containers on kubernetes☆19Sep 14, 2021Updated 4 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Nov 5, 2022Updated 3 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Oct 27, 2021Updated 4 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆12Feb 25, 2022Updated 4 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆56Mar 12, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Toolbox package for organizing and working with TCGA data☆29Mar 26, 2026Updated last month
- genomics toolbox that supports both graphical and command-line execution☆15Mar 4, 2026Updated last month
- ☆18Dec 1, 2017Updated 8 years ago
- A command line tool for rapid visualisation of AlphaFold2 and AlphaFold3 predictions.☆14Oct 21, 2025Updated 6 months ago
- ☆14Aug 30, 2025Updated 8 months ago
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.☆22Jan 22, 2026Updated 3 months ago
- Fine-mapping method only using summary statistics☆20Mar 23, 2016Updated 10 years ago
- Explore the cancer relevance of your gene list☆54Dec 17, 2025Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The R package for SVM with GPU architecture based on the GTSVM software☆32Aug 4, 2021Updated 4 years ago
- Orchestrating Hi-C analysis with Bioconductor☆11Jul 11, 2025Updated 9 months ago
- Clonality Inference in Multiple Tumor Samples using Phylogeny☆15May 8, 2015Updated 10 years ago
- Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing☆41Dec 11, 2018Updated 7 years ago
- ☆16Sep 21, 2021Updated 4 years ago
- Fast motif matching in R☆47Jan 24, 2024Updated 2 years ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Sep 10, 2018Updated 7 years ago