Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources
☆34Oct 27, 2021Updated 4 years ago
Alternatives and similar repositories for wdlRunR
Users that are interested in wdlRunR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15May 8, 2026Updated last month
- Computable build reports, package metadata, and download stats from the Bioconductor project☆22May 20, 2026Updated 3 weeks ago
- Reproducible Workflows, curated at the Fred Hutch☆12Jan 21, 2026Updated 4 months ago
- Detection of super-enhancers in cancer data☆21Apr 10, 2023Updated 3 years ago
- Build and maintain multiple custom conda environments all in one place.☆40Dec 3, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R bindings to IPFS☆11Mar 23, 2017Updated 9 years ago
- Quick Generalized Full Matching in R☆11Nov 29, 2023Updated 2 years ago
- cancereffectsizeR: An R package for calculation of somatic mutation rates and quantification of selection in cancer☆20Jan 6, 2026Updated 5 months ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- Develop and host GitHub actions for Bioconductor☆11Apr 22, 2021Updated 5 years ago
- ☆20Feb 13, 2016Updated 10 years ago
- 🧲 Multi-step adaptive estimation for reducing false positive selection in sparse regressions☆13Jul 21, 2024Updated last year
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 6 months ago
- List of computational resources for analyzing microbial sequencing data.☆67Nov 18, 2025Updated 6 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Apr 30, 2026Updated last month
- Explore the cancer relevance of your gene list☆54May 31, 2026Updated 2 weeks ago
- GitHub action to run CRAN-style reverse dependency check☆34Jan 12, 2026Updated 5 months ago
- Helper script for bioconductor/bioconductor_docker☆13May 19, 2026Updated 3 weeks ago
- ☆10Jan 8, 2018Updated 8 years ago
- Amazon Web Services Bundle Package☆15Jan 12, 2020Updated 6 years ago
- ClusterMap is an R package to analyze and compare two or more single cell expression datasets.☆21Jan 17, 2023Updated 3 years ago
- RNA-Seq Snakemake example with Jekyll homepage creation☆20Feb 20, 2014Updated 12 years ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Jan 12, 2026Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This python package is for transitioning bioconductor from SVN to git☆14Mar 15, 2023Updated 3 years ago
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Jul 15, 2019Updated 6 years ago
- ☆11Sep 5, 2018Updated 7 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- Native SSH client in R based on libssh☆130Mar 26, 2025Updated last year
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Nov 22, 2017Updated 8 years ago
- R package future.callr: A Future API for Parallel Processing using 'callr'☆62Jun 5, 2026Updated last week
- ARCHIVED Set Up 'Travis' for Testing and Deployment☆59May 10, 2022Updated 4 years ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆21May 24, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- workshop platform provider for running docker containers on kubernetes☆19Sep 14, 2021Updated 4 years ago
- A data analysis web-app written in R Shiny.☆22May 6, 2019Updated 7 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11May 5, 2020Updated 6 years ago
- conda recipes for genomic data☆84Jul 31, 2021Updated 4 years ago
- Human transcription factor target genes from 6 databases in convenient R format.☆87Oct 4, 2018Updated 7 years ago
- Toolbox package for organizing and working with TCGA data☆30May 25, 2026Updated 3 weeks ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10May 14, 2026Updated last month