XEnograft Visualization & Analysis
☆11Oct 18, 2025Updated last year
Alternatives and similar repositories for Xeva
Users that are interested in Xeva are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- single cell and bulk RNASeq analysis scripts☆13Jan 13, 2022Updated 4 years ago
- A Template for Clear and Simple Documentation of Bioinformatics Code☆16Jan 24, 2018Updated 8 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated last year
- ☆15Sep 21, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Superseded by https://github.com/MD-Anderson-Bioinformatics/BatchEffectsPackage☆12Aug 13, 2020Updated 6 years ago
- tumor - cancer cell line alignment. Use it on the depmap portal or install it with pip.☆15Dec 5, 2023Updated 2 years ago
- Detection of super-enhancers in cancer data☆22Apr 10, 2023Updated 3 years ago
- The spatial representation learning for single-cell spatial transcriptomics☆17Aug 4, 2026Updated 2 months ago
- ☆17Apr 11, 2022Updated 4 years ago
- ☆15Jan 24, 2024Updated 2 years ago
- Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation☆11Dec 19, 2016Updated 9 years ago
- Ten quick tips to finish that manuscript that's 90% complete.☆13Mar 30, 2022Updated 4 years ago
- International BioHackathon Directory of Events, Projects and Communities☆12Jul 7, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Apr 27, 2023Updated 3 years ago
- A Shiny App for Interactive Multi-OMICS Cancer Data Visualization and analysis☆22Feb 14, 2024Updated 2 years ago
- This repository is the working directory for the Garnet-Forest bundle of python scripts for analyzing diverse forms of 'omic' data in a n…☆31Jan 9, 2019Updated 7 years ago
- R package to analyze large-scale pharmacogenomic datasets.☆72Aug 4, 2026Updated 2 months ago
- Toolbox package for organizing and working with TCGA data☆31Jul 2, 2026Updated 3 months ago
- code implementing methods for pooling bulk and single cell data and FISH data for copy number deconvolution☆10Jan 31, 2020Updated 6 years ago
- A pipeline to generate a Deep Nerual Network cell type deconvolution model for bulk RNASeq samples from single cell experiment data☆12Nov 17, 2020Updated 5 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆33Jun 12, 2026Updated 4 months ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆23Oct 8, 2025Updated last year
- Detecting cancer subtypes with machine learning.☆10Feb 5, 2020Updated 6 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆38Aug 9, 2019Updated 7 years ago
- ☆38Jul 26, 2016Updated 10 years ago
- Semi-parametric simulation of bulk and single cell RNA-seq data☆10Nov 17, 2024Updated last year
- ☆28Jan 25, 2022Updated 4 years ago
- scVIVA-Tools: A unified toolkit for spatial transcriptomics analysis☆15Updated this week
- 📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny…☆104May 11, 2026Updated 5 months ago
- Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data☆11Jul 13, 2020Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- automatic update Clinvar db for ANNOVAR☆11Updated this week
- Shiny GUI application for genomics meta-analysis☆22Nov 4, 2020Updated 5 years ago
- R package to do enrichment analysis for neoantigens☆13Feb 21, 2022Updated 4 years ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 9 years ago
- Code, visuals and datasets related to the geneDRAGNN paper.☆10Oct 24, 2023Updated 3 years ago
- Making it easy to talk to GitHub from R☆19Jun 18, 2021Updated 5 years ago
- Documentation for PEP specification and all PEPkit software☆10Oct 26, 2026Updated last week