bhklab / Xeva
XEnograft Visualization & Analysis
☆11Updated 3 weeks ago
Alternatives and similar repositories for Xeva:
Users that are interested in Xeva are comparing it to the libraries listed below
- Explore the cancer relevance of your gene list☆51Updated last month
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆17Updated 3 years ago
- ☆28Updated 6 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- ☆12Updated 5 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆22Updated 6 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- ☆40Updated 7 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆35Updated last week
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- Clone of the Bioconductor repository for the scRNAseq package.☆25Updated 3 months ago
- Fast motif matching in R☆47Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- An R package to analyze single-cell V(D)J data☆25Updated last year
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆41Updated last year
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- ☆12Updated 11 months ago
- ☆22Updated 5 months ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 5 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 5 years ago
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.☆28Updated 4 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 9 months ago