bhklab / XevaLinks
XEnograft Visualization & Analysis
☆11Updated 2 weeks ago
Alternatives and similar repositories for Xeva
Users that are interested in Xeva are comparing it to the libraries listed below
Sorting:
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 4 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- ☆30Updated 7 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- ☆41Updated 7 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆46Updated 2 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆57Updated last year
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆19Updated last month
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- Explore the cancer relevance of your gene list☆51Updated 6 months ago
- ☆12Updated 5 years ago
- Filtering of PDX samples for mouse derived reads☆28Updated 2 years ago
- ☆42Updated 4 years ago
- Code to reproduce TNBC analysis and figures☆24Updated 3 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 6 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated this week
- R package for Flexible dot plots☆29Updated 3 years ago
- Fast motif matching in R☆46Updated last year
- ☆34Updated 6 years ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- Tools for assessing clustering robustness☆25Updated last week
- Identify and correct invalid gene symbols☆59Updated 9 months ago