tidyomics / plyranges
A grammar of genomic data transformation
☆143Updated 2 months ago
Alternatives and similar repositories for plyranges:
Users that are interested in plyranges are comparing it to the libraries listed below
- Shiny apps for NGS etc based on reusable components created using Shiny modules☆75Updated 3 weeks ago
- Grid and ggplot2 based visualization for biological data☆111Updated last year
- fastqcr: Quality Control of Sequencing Data☆69Updated last year
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆90Updated 3 months ago
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆103Updated 3 years ago
- Brings bulk and pseudobulk transcriptomics to the tidyverse☆168Updated this week
- ggplot2 version of heatmap☆87Updated last year
- 𝐠𝐠𝐯𝐨𝐥𝐜 effortlessly translates differential expression datasets and RNAseq data into informative volcano plots. Highlight genes of …☆63Updated last year
- [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data☆71Updated last week
- Genome Interval Arithmetic in R☆90Updated last week
- Decorate a plot with associated information☆102Updated this week
- MSigDB gene sets for multiple organisms in a tidy data format☆72Updated 3 weeks ago
- Representation and manipulation of genomic intervals☆44Updated 3 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆61Updated last month
- Venn Diagram by ggplot2, with really easy-to-use API.☆170Updated last week
- RNA-seq workflow: exploratory analysis and differential expression☆74Updated last year
- Publication-quality sequence logos in R☆211Updated 4 months ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆37Updated 3 months ago
- Count Regression for Correlated Observations with the Beta-binomial☆105Updated 5 months ago
- R data package for annotating/converting Gene IDs☆163Updated last year
- Course material for CSAMA: Statistical Data Analysis for Genome Scale Biology☆92Updated 7 months ago
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆106Updated last month
- Seurat meets tidyverse. The best of both worlds.☆158Updated 6 months ago
- Visualize and annotate genomic coverage with ggplot2☆254Updated 3 weeks ago
- 2018 Bioconductor Workshops☆75Updated 5 years ago
- Mixed models @lme4 + custom covariances + parameter constraints☆52Updated 4 years ago
- Visualizing transcript structure and annotation using ggplot2☆143Updated 5 months ago
- Make Interactive Complex Heatmaps☆132Updated 11 months ago
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Updated last month
- ☆169Updated 4 years ago