☆23Sep 6, 2016Updated 9 years ago
Alternatives and similar repositories for NGS_Data_Analysis_Course
Users that are interested in NGS_Data_Analysis_Course are comparing it to the libraries listed below
Sorting:
- This repo contains tutorials for different NGS analysis methods☆13Nov 29, 2021Updated 4 years ago
- Deprecated, see https://labsyspharm.github.io/rnaseq/☆12Feb 28, 2019Updated 7 years ago
- GitKraken lesson (forked from HBS-RCS)☆10Jul 15, 2021Updated 4 years ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆15Oct 10, 2019Updated 6 years ago
- ☆11Oct 8, 2018Updated 7 years ago
- ProTiler method for the analysis and visualization of CRISPR screens with tiling-sgRNA design☆14Feb 28, 2023Updated 3 years ago
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 2 years ago
- Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines☆18Mar 12, 2026Updated last week
- Cytometry by time-of-flight(CyTOF) data is very useful in studying the presence/absence of antigens/surface markers at single cell level.…☆14Jun 1, 2020Updated 5 years ago
- ☆21Jul 4, 2017Updated 8 years ago
- R package for bcbio single-cell RNA-seq analysis.☆30Sep 9, 2024Updated last year
- Human transcription factor target genes from 6 databases in convenient R format.☆86Oct 4, 2018Updated 7 years ago
- Turkey Map with R☆10Nov 24, 2017Updated 8 years ago
- Pipeline for processing inDrops sequencing data☆75Oct 26, 2018Updated 7 years ago
- In process work on active learning tutorials☆10Feb 19, 2024Updated 2 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆19Dec 9, 2020Updated 5 years ago
- a web-based R shiny application that wraps DESeq2 R package☆13Apr 19, 2020Updated 5 years ago
- Collection of tools to retrieve siRNA (small interfering RNA) candidate sequences targeting your gene of interest from popular siRNA desi…☆18Nov 22, 2022Updated 3 years ago
- HELM2NotationToolkit is the reference implementation of the new HELM 2 standard with support for ambiguous structures.☆10May 24, 2023Updated 2 years ago
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆34Jul 14, 2017Updated 8 years ago
- Matlab implementation of the Elastic Principal Graphs (ElPiGraph) method☆14Dec 6, 2022Updated 3 years ago
- Population balance analysis☆44Apr 25, 2019Updated 6 years ago
- Reference implementation for the Balsa molecular line notation.☆19Apr 18, 2024Updated last year
- ☆14Mar 11, 2022Updated 4 years ago
- ARES implement in PyTorch☆15Feb 27, 2024Updated 2 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21May 22, 2023Updated 2 years ago
- bradner lab computation pipeline scripts☆54Aug 22, 2025Updated 6 months ago
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated last year
- Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells☆17Jul 26, 2024Updated last year
- Creates Venn diagrams for OrthoMCL output☆17Aug 9, 2017Updated 8 years ago
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25May 13, 2020Updated 5 years ago
- Efficient retrieval head analysis with triton flash attention that supports topK probability☆13Jun 15, 2024Updated last year
- Automatic RNA-Seq Pipelines with Interactive Report☆25Jun 1, 2025Updated 9 months ago
- Microbial Whole Genome Sequence data analysis labs for 2014☆29Jul 31, 2020Updated 5 years ago
- Snakemake pipeline for simulating shotgun metagenomic samples☆29Mar 13, 2026Updated last week
- My notes/usage examples for various Bioconductor packages☆15Jan 9, 2017Updated 9 years ago
- Scripts and notebooks for models that enable better causal inferences in psychological sciences☆11Dec 24, 2024Updated last year
- A collection of scientific computing notebooks☆22Feb 21, 2024Updated 2 years ago