PeeperLab / Rtoolbox
Toolbox with R scripts
☆38Updated 6 years ago
Alternatives and similar repositories for Rtoolbox:
Users that are interested in Rtoolbox are comparing it to the libraries listed below
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated 2 years ago
- Identify and correct invalid gene symbols☆59Updated 3 months ago
- Building on material from Introduction to Single Cell RNA-Seq, this workshop aims to cover advanced topics, including TCR and trajectory …☆14Updated last year
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- ☆10Updated 6 years ago
- Harvard FAS informatics scRNAseq workshop website☆37Updated 5 years ago
- ☆53Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆71Updated 4 years ago
- R package to visualize scRNA sequencing data.☆20Updated 3 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 8 months ago
- R package for robust clustering of single cell RNA sequencing data☆38Updated last year
- An r package that works as a wrapper to homologene☆42Updated last year
- Toolkit for Single-Cell Velocity☆54Updated last month
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- R package for specialised analysis of single cell data☆37Updated 2 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆35Updated 6 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆42Updated last year
- ☆36Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 3 weeks ago
- Processing scripts for single cell DNA sequencing on the Tapestri platform☆24Updated last year
- Visualise correlation results and test significancies of these☆21Updated 5 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆48Updated 3 months ago
- Normalize CITEseq Data☆65Updated 8 months ago
- ATAC-seq Quality Control☆22Updated last month
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- ATAC_seq Workshop☆14Updated 7 years ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆53Updated 4 years ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆27Updated last year
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆31Updated 5 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago