bcgsc / kollectorLinks
de novo targeted gene assembly
☆22Updated 4 years ago
Alternatives and similar repositories for kollector
Users that are interested in kollector are comparing it to the libraries listed below
Sorting:
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Paint genomes with taxa-specific k-mer probabilities☆15Updated 3 years ago
- ☆20Updated last year
- fastq quality assessment and filtering tool☆18Updated 3 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆23Updated 3 years ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 4 years ago
- Mapping-free variant caller for short-read Illumina data☆20Updated 5 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 2 months ago
- De novo VIral Genome Annotator☆23Updated last year
- Read nanopore sequence reads in real-time☆14Updated 8 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Updated 9 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆36Updated 5 years ago
- Utility program for extracting sequences from a fasta/fastq file☆35Updated 11 months ago
- Find Unique genomic Regions☆32Updated last month
- Scaffolding with assembly likelihood optimization☆21Updated 4 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Reference genome quality scores☆21Updated 4 years ago
- Indel-aware consensus for aligned BAM☆21Updated 3 months ago
- ☆15Updated 7 years ago
- ☆18Updated 8 years ago
- Functions to compare a SV call sets against a truth set.☆30Updated 5 months ago
- ELECTOR: EvaLuator of Error Correction Tools for lOng Reads☆15Updated 4 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago
- The final version 2 release of our software to detect core genes in eukaryotic genomes☆29Updated 10 years ago
- Identifying repeats in high-throughput sequencing data☆16Updated last year
- A k-mer search engine for all Sequence Read Archive public accessions☆35Updated last year
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Updated 6 years ago