Create your own PanViz visualizations
☆21Nov 20, 2017Updated 8 years ago
Alternatives and similar repositories for PanVizGenerator
Users that are interested in PanVizGenerator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fast alignment-free pangenome creation and exploration☆28Apr 16, 2020Updated 5 years ago
- Visualization of the pan-genome output by panX☆67Jun 16, 2025Updated 9 months ago
- an interactive viewer for populations of bacterial genomes linked by a phylogeny☆132Feb 26, 2024Updated 2 years ago
- D3 based visualisation for comparative genomics☆15Oct 6, 2016Updated 9 years ago
- Talk to the NCBI EUtils☆23Oct 8, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Pan-genome wide association studies☆213May 29, 2024Updated last year
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated 7 months ago
- Interactive, web tool for exploring pan-genome of bacterial strains☆50Jan 14, 2026Updated 3 months ago
- R markdown documents copied from other folders on Dec 15th 2021☆14Nov 4, 2025Updated 5 months ago
- Gene Absence Presence Identification tool.☆27Mar 28, 2025Updated last year
- Scripts to analyze gene content and make a concatenated alignment of core genes from bacterial genomes.☆19Jul 20, 2018Updated 7 years ago
- This repository has been archived, currently maintained version is at https://github.com/iii-companion/companion☆21Mar 22, 2021Updated 5 years ago
- Creates Venn diagrams for OrthoMCL output☆17Aug 9, 2017Updated 8 years ago
- A whole-genome and alignment-free prokaryotic phylogeny tool☆23Mar 9, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Program for finding horizontal gene transfer using BLAST result☆11May 26, 2023Updated 2 years ago
- Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks☆25Jun 11, 2024Updated last year
- Calculate Average Nucleotide Identity (ANI) for prokaryotic genomes☆18Apr 3, 2022Updated 4 years ago
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…☆11Sep 22, 2020Updated 5 years ago
- DDBJ Fast Annotation and Submission Tool☆84Updated this week
- In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…☆84Apr 1, 2018Updated 8 years ago
- Sliding window dN/dS vs. functional protein domain comparison tool. Given VectorBase gene id inputs it will aggregate various useful Bioi…☆20Dec 10, 2024Updated last year
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Feb 10, 2026Updated 2 months ago
- A novel bioinformatics pipeline for recent horizontal gene transfer detecting.☆12Nov 13, 2018Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Metagenomic binning suite☆29Sep 30, 2022Updated 3 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- Formats Roary output for viewing in FriPan☆11May 23, 2018Updated 7 years ago
- Processing pipeline for pan-genome visulization and exploration☆144Oct 9, 2023Updated 2 years ago
- This tool performs an automatic identification, annotation, and analysis of the MYB gene family in plants. It can be applied to new trans…☆20Oct 12, 2025Updated 6 months ago
- PanGenomePipeline☆16Apr 10, 2024Updated 2 years ago
- Rapid large-scale prokaryote pan genome analysis☆375Nov 3, 2025Updated 5 months ago
- ☆13Sep 4, 2017Updated 8 years ago
- Masks recombination as detected by ClonalFrameML or Gubbins and draws an SVG☆21Feb 15, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆16Mar 31, 2022Updated 4 years ago
- Exploring tree diversity☆14Mar 13, 2017Updated 9 years ago
- Detect contigs of complete circular genomes☆23Jun 6, 2019Updated 6 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Aug 23, 2019Updated 6 years ago
- ☆12Apr 8, 2021Updated 5 years ago
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆251Mar 31, 2026Updated 2 weeks ago
- A very simple BLAST filtering pipeline☆19Mar 28, 2014Updated 12 years ago