tseemann / homebrew-bioinformatics-linuxLinks
Homebrew formulae for bioinformatics software only available for Linux
☆27Updated 6 years ago
Alternatives and similar repositories for homebrew-bioinformatics-linux
Users that are interested in homebrew-bioinformatics-linux are comparing it to the libraries listed below
Sorting:
- Visualise interstrain recombination from environmental samples.☆26Updated 6 years ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- ☆19Updated 8 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆43Updated 4 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- reference free variant assembly☆33Updated 2 years ago
- Collection of utilities for working with PacBio-based assemblies☆13Updated 2 years ago
- blast, shmlast☆22Updated 4 years ago
- Ebola virus surveillance☆16Updated 8 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Course material for the de novo assembly part of the INF-BIO9120 course at Univ. of Oslo Fall 2013☆37Updated 11 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI☆29Updated 6 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.☆27Updated 3 years ago
- Color DNA/RNA bases in terminal output☆21Updated 7 years ago
- Fast but inaccurate adapter trimmer for Illumina reads☆16Updated 3 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- Nanopore desc☆18Updated 9 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Updated 5 years ago
- sort genomic data☆36Updated 5 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Updated 4 years ago
- Biological Graphic tool in Python☆34Updated 5 years ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Updated 7 years ago
- ☆18Updated 9 years ago
- Confirming specific taxonomic groups within your samples.☆19Updated 4 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 6 years ago