Maximum mean discrepancy comparisons for single cell profiling experiments
☆20Feb 9, 2022Updated 4 years ago
Alternatives and similar repositories for scmmd
Users that are interested in scmmd are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for IDentification and Enumeration of Spliced and Unspliced Read Fragments☆19Aug 24, 2026Updated 3 weeks ago
- Integrating temporal gene expression modalities for trajectory inference and disease prediction☆11Sep 20, 2022Updated 4 years ago
- TARDIS: Topological Algorithms for Robust DIscovery of Singularities☆45Aug 7, 2026Updated last month
- Pathway-Regularized Matrix Factorization☆12Apr 6, 2020Updated 6 years ago
- ☆12Jul 13, 2018Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MAGIC - imputation and de-noising single-cell RNA seq data sets☆28Sep 19, 2019Updated 7 years ago
- Semi-supervised adversarial neural networks for classification of single cell transcriptomics data☆78Jun 10, 2026Updated 3 months ago
- ☆13Jan 8, 2026Updated 8 months ago
- A quantitative framework for evaluating data structure preservation by dimensionality reduction techniques☆16Jun 1, 2021Updated 5 years ago
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- Fault-Attention Generative Probabilistic Adversarial Autoencoder for Machine Anomaly Detection☆18Oct 12, 2020Updated 5 years ago
- Python module to analyse CRISPR-based libraries☆16Apr 1, 2021Updated 5 years ago
- scPrisma is a spectral analysis method, for pseudotime reconstruction, informative genes inference, filtering, and enhancement of underly…☆21Mar 31, 2024Updated 2 years ago
- SCelVis - web-based visualization of single-cell data. Demo☆22Mar 20, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆22Apr 16, 2024Updated 2 years ago
- FulQuant pipeline to identify and quantify transcript isoforms based on Nanopore long-read data☆10Jul 20, 2022Updated 4 years ago
- Information-based dimensionality reduction☆30Dec 14, 2024Updated last year
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆16Jun 28, 2024Updated 2 years ago
- ☆13Jan 6, 2021Updated 5 years ago
- This code allows is for diversity picking across multiple different, and potentially overlapping chemical compound classes, while at the …☆12Oct 30, 2020Updated 5 years ago
- Codes used for all the data analysis steps in the paper "Single-cell transcriptomics identifies an effectorness gradient shaping the resp…☆16Apr 15, 2020Updated 6 years ago
- Code for "Revisiting Batch Norm Initialization".☆12Jul 14, 2022Updated 4 years ago
- Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks☆88May 27, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CaDRReS-Sc is a framework for analyzing drug response heterogeneity based on single-cell RNA-seq data☆20May 7, 2022Updated 4 years ago
- SHARP: Single-cell RNA-seq Hyper-fast and Accurate processing via ensemble Random Projection☆18Apr 26, 2021Updated 5 years ago
- ☆11Jul 6, 2023Updated 3 years ago
- Data point cloud separability analysis based on linear Fisher discriminants☆10Nov 22, 2019Updated 6 years ago
- Dynamical systems methods for RNA velocity analysis☆24May 19, 2021Updated 5 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Dec 14, 2021Updated 4 years ago
- ☆11Dec 8, 2023Updated 2 years ago
- ☆13Jun 16, 2025Updated last year
- Extract the Ensembl genes catalog to simple tables☆18Dec 22, 2025Updated 9 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Reconstruction of spatial context of gene expression with optimal transport☆11Mar 14, 2019Updated 7 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- ☆134Nov 17, 2023Updated 2 years ago
- MolDesigner: Interactive Design of Efficacious Drugs with Deep Learning (NeurIPS 2020 Demo)☆16Nov 27, 2020Updated 5 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated last year
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 4 years ago
- ☆32May 11, 2026Updated 4 months ago