A Library for Denoising Single-Cell Data with Random Matrix Theory
☆39Aug 16, 2023Updated 3 years ago
Alternatives and similar repositories for randomly
Users that are interested in randomly are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- Code for reproducing the Sei manuscript results☆17Jan 25, 2022Updated 4 years ago
- Single Cell RNA Intron-Exon counting☆12May 7, 2020Updated 6 years ago
- ☆11May 19, 2020Updated 6 years ago
- TCR Reconstruction Algorithm for Paired-End Single cell☆14Oct 13, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A tutorial on NMFreg applied to cerebellum data.☆12Apr 7, 2020Updated 6 years ago
- Python code for "Fast Bayesian nonnegative matrix factorisation and tri-factorisation", presented at NIPS 2016 Workshop on Advances in Ap…☆21Jun 10, 2018Updated 8 years ago
- Platform-agnostic quantification of technical noise in single-cell RNA-seq. Supports ONT, PacBio/Kinnex, and short-read 10x / BD Rhapsody…☆13Sep 10, 2026Updated last month
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆53Jul 12, 2018Updated 8 years ago
- ☆18Aug 14, 2017Updated 9 years ago
- MXM: Discovering Multiple, Statistically-Equivalent Signatures. Feature selection methods for identifying minimal, statistically-equivale…☆12Sep 6, 2019Updated 7 years ago
- ☆10Jan 24, 2021Updated 5 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Sep 24, 2018Updated 8 years ago
- ☆12Sep 20, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code for reproducing results from the paper "RNA velocity and protein acceleration from single-cell multiomics experiments."☆11Feb 1, 2020Updated 6 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆12Oct 31, 2018Updated 7 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Oct 11, 2019Updated 7 years ago
- Workflows to generate cis-regulatory datasets used for variant-to-gene (V2G) assignment in Open Targets Genetics☆11May 11, 2026Updated 5 months ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆22Sep 16, 2019Updated 7 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆40Jun 6, 2023Updated 3 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 10 years ago
- scRNAseq integration with triplet neural networks☆41Feb 2, 2026Updated 8 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Images for Saturn Cloud☆12Updated this week
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Aug 9, 2019Updated 7 years ago
- ☆10Oct 7, 2024Updated 2 years ago
- ☆19Sep 18, 2019Updated 7 years ago
- ☆15Jun 1, 2019Updated 7 years ago
- ☆11Feb 18, 2019Updated 7 years ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆15May 1, 2023Updated 3 years ago
- ENHANCE: Accurate denoising of single-cell RNA-Seq data (Python implementation)☆15Jun 5, 2019Updated 7 years ago
- Hierarchical Random Forest for Information Transfer☆13May 26, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GREAT algorithm in Python☆17Oct 24, 2022Updated 4 years ago
- Matching T-cell receptor repertoires to a database of antigen specificities☆39Oct 21, 2026Updated last week
- Single-cell RNA-seq analysis of human germline cells and their niche cells☆11Jun 6, 2017Updated 9 years ago
- ☆10Jun 13, 2018Updated 8 years ago
- Companion repository to Lause, Berens & Kobak (2021): "Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data", Gen…☆41May 6, 2022Updated 4 years ago
- ☆12May 17, 2022Updated 4 years ago
- Mapping sequencing data to De Bruijn graphs, fast☆38Updated this week