sbg / sevenbridges-pythonLinks
SevenBridges Python Api bindings
☆46Updated 9 months ago
Alternatives and similar repositories for sevenbridges-python
Users that are interested in sevenbridges-python are comparing it to the libraries listed below
Sorting:
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- VAPr: A Python package for NoSQL variant data storage, annotation and prioritization☆37Updated 4 years ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- Scalable RNA-seq analysis☆73Updated 4 years ago
- CWL tools and workflows for GGR☆22Updated 4 years ago
- Efficient handling of FASTQ files from Python☆51Updated last week
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated this week
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline☆41Updated 5 years ago
- Examples for the Google Genomics Pipelines API.☆50Updated 7 years ago
- python access to UCSC genomes database☆136Updated 5 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 11 months ago
- ☆63Updated 9 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 3 years ago
- Super small biological datasets for unit testing☆62Updated 6 years ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆71Updated last month
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 4 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆90Updated last year
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- create a gemini-compatible database from a VCF☆55Updated 4 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Updated 6 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆84Updated 3 months ago
- Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data☆87Updated 5 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Retrieve data in genomic intervals with a Python interface for tabix.☆82Updated 8 years ago
- Fast spliced aligner with low memory requirements☆41Updated 10 years ago