SevenBridges Python Api bindings
☆46Feb 14, 2025Updated last year
Alternatives and similar repositories for sevenbridges-python
Users that are interested in sevenbridges-python are comparing it to the libraries listed below
Sorting:
- Curated collection of open-source bioinformatics tools☆28Feb 5, 2019Updated 7 years ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Nov 18, 2020Updated 5 years ago
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆36Jan 28, 2022Updated 4 years ago
- A tutorial on breast cancer cell classification using deep learning in Tensorflow☆12Sep 21, 2017Updated 8 years ago
- Deprecated, see https://labsyspharm.github.io/rnaseq/☆12Feb 28, 2019Updated 7 years ago
- ☆12Feb 19, 2017Updated 9 years ago
- ☆12Dec 8, 2021Updated 4 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Mar 17, 2016Updated 9 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- Core consonance utilities for scheduling, reporting on, and provisioning VMs for workflows☆14Jun 27, 2018Updated 7 years ago
- A configurable de novo assembly pipeline☆28Jun 29, 2016Updated 9 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- ☆36Sep 6, 2017Updated 8 years ago
- ☆43Apr 20, 2016Updated 9 years ago
- zero-inflated negative binomial gene expression in R☆20Jan 31, 2018Updated 8 years ago
- normalize, left-align, trim, validate and clean VCF files☆20Jul 22, 2015Updated 10 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Dec 14, 2021Updated 4 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Jan 19, 2021Updated 5 years ago
- ☆11Oct 21, 2016Updated 9 years ago
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 8 years ago
- Novel Adjacency Identification with Barcoded Reads☆13Apr 19, 2022Updated 3 years ago
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 10 years ago
- Alignment and variant-calling pipeline for Illumina HIV sequences.☆11May 19, 2020Updated 5 years ago
- stageR package☆13Feb 28, 2023Updated 3 years ago
- Assemble the Genome in a Bottle sequencing data☆10Aug 4, 2017Updated 8 years ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 8 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Feb 20, 2018Updated 8 years ago
- vgraph is a command line application and Python library to compare genetic variants using variant graphs. ``vgraph`` utilizes a graph re…☆43Sep 16, 2021Updated 4 years ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Haplotype-based somatic genome simulator☆10May 19, 2017Updated 8 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- An extensible Ruby on Rails web-service application and database for visualising HTGS data☆18Mar 7, 2014Updated 11 years ago
- Shiny app for visualization, exploration of mouse brain single cell gene expression☆11Oct 31, 2018Updated 7 years ago
- A set of processes/pipelines for bioinformatics☆14Updated this week
- Provides easy read/write access to genomic tracks☆22Mar 18, 2016Updated 9 years ago
- fast webservices based query tool for large sets of genomic features☆25May 10, 2025Updated 9 months ago
- Knowledge Independent Network Construction☆12Dec 23, 2025Updated 2 months ago