Alternatives and similar repositories for fourfront

Users that are interested in fourfront are comparing it to the libraries listed below

• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• johandahlberg / piper
  A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…
  ☆21Updated 9 years ago
• stjude / proteinpaint
  Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.
  ☆44Updated this week
• biobuilds / biobuilds
  Curated collection of open-source bioinformatics tools
  ☆28Updated 6 years ago
• dnanexus-archive / dx-cwl
  Import and run CWL workflows on DNAnexus (alpha)
  ☆13Updated 7 years ago
• fikipollo / paintomics3
  Integrative visualization of multiple omic datasets onto KEGG pathways.
  ☆11Updated 4 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆48Updated last week
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• hammerlab / vcf-annotate-polyphen
  A tool to annotate human VCF files with PolyPhen2 effect measures
  ☆10Updated 3 years ago
• abs-tudelft / ArrowSAM
  Genomics datastructures using Apache Arrow
  ☆20Updated 5 years ago
• Genomon-Project / paplot
  paplot creates various dynamic and interactive reports for cancer genome analysis.
  ☆26Updated 2 years ago
• ga4gh-beacon / specification
  GA4GH Beacon specification.
  ☆33Updated 2 years ago
• openvax / gene-lists
  Gene lists related to cancer immunotherapy
  ☆14Updated last year
• ericminikel / minimal_representation
  Convert genetic variants to minimal representation
  ☆23Updated 8 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 3 years ago
• jrderuiter / geneviz
  Library for visualising genomic features in Python.
  ☆15Updated 8 years ago
• JEFworks / ubit2
  User-friendly Bioinformatics Tools
  ☆18Updated 4 years ago
• csiro-crop-informatics / biokanga
  An integrated high performance bioinformatics toolkit
  ☆23Updated 6 years ago
• genenetwork / genenetwork2
  GeneNetwork (2nd generation)
  ☆38Updated this week
• medvedevgroup / varmatch
  robust matching of small variant datasets using flexible scoring schemes
  ☆11Updated 5 years ago
• verilylifesciences / variant-qc
  Quality control methods for human genomic variants.
  ☆62Updated 3 years ago
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago
• opencb / biodata
  Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics. Found a bu…
  ☆31Updated 2 weeks ago
• alimanfoo / vcfnp
  Load numpy arrays and HDF5 files from VCF (variant call format)
  ☆31Updated 8 years ago
• phenopolis / pheno4j
  Pheno4j: a graph based HPO to NGS database
  ☆33Updated 2 years ago
• FRED-2 / Fred2
  Python-based framework for computational immunomics
  ☆40Updated 4 years ago
• wurmlab / genevalidator
  GeneValidator: Identify problems with predicted genes
  ☆49Updated last year
• uio-cels / genomicgraphcoords
  Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes
  ☆11Updated 8 years ago
• amplab / smash
  Benchmarking toolkit for variant calling
  ☆48Updated 5 years ago
• StanfordBioinformatics / loom
  A tool for running bioinformatics workflows locally or in the cloud.
  ☆30Updated 6 years ago